Gene Rsph17025_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3271 
Symbol 
ID5086020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp141543 
End bp142295 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content71% 
IMG OID640484843 
ProductABC transporter related 
Protein accessionYP_001169460 
Protein GI146279302 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.910977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCG CGCTGTCGGT CCGGGGGCTC AGCAAGAGCT TTGACGCGCT GAAGGTGAGC 
GACGCCATCA CCTTCGATCT GGCCGAGGGC GAGATTCACG CCATCATCGG CCCGAACGGC
GCGGGCAAGA CCACGCTGAT CCACCAGCTG TCGGGCAGCC TCGCGCCCGA TGCGGGGCGG
ATCCTCCTTG GGGGCGAGGA CATCACCCGC CTTCCCATGG CGGCCCGGGC GCGGCGGGGT
CTGGCGCGGT CGTTCCAGAT CACCTCGATC CTGCCGGGCT TCACCGCCCT CGAGAATGTG
GCGCTGGCGG TGCAGGCGCG CTCGGGATCG AGCTTCCGCT TCCTCCGCCC GGCCGCGTCC
GAACGTGCGC TGAACGAGGC CGCGGCTGCG GCGCTGGCCG CGGCGGGGCT CTGCGGGGCC
GAGGGTCGGA TCGCGGGCAC GCTCTCGCAC GGCGAGAAGC GGCAGCTCGA GATCGCCATT
GCGCTGGCGA TGCAGCCGAA GGTTCTGCTC CTTGACGAGC CGCTGGCGGG CACCGGCCAC
CGCGAAAGCG CGGCGCTGCT TCAGCTGATT GCGGGCCTCA AGGGGCGGCT CTCGATCGTC
CTGATCGAGC ATGACATGGA GGCGGTCTTC GCTCTGGCCG ACCGGATCAG CGTTCTGGTC
TATGGCCGGG TGATCGCCAC CGGGCGCCCG GAGGCGATCC GGGCGGATGC CGAGGTGCGC
GCGGCCTATC TGGGCGATGA GGAGGAGAGC TGA
 
Protein sequence
MTPALSVRGL SKSFDALKVS DAITFDLAEG EIHAIIGPNG AGKTTLIHQL SGSLAPDAGR 
ILLGGEDITR LPMAARARRG LARSFQITSI LPGFTALENV ALAVQARSGS SFRFLRPAAS
ERALNEAAAA ALAAAGLCGA EGRIAGTLSH GEKRQLEIAI ALAMQPKVLL LDEPLAGTGH
RESAALLQLI AGLKGRLSIV LIEHDMEAVF ALADRISVLV YGRVIATGRP EAIRADAEVR
AAYLGDEEES