Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3271 |
Symbol | |
ID | 5086020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 141543 |
End bp | 142295 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640484843 |
Product | ABC transporter related |
Protein accession | YP_001169460 |
Protein GI | 146279302 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.910977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCCG CGCTGTCGGT CCGGGGGCTC AGCAAGAGCT TTGACGCGCT GAAGGTGAGC GACGCCATCA CCTTCGATCT GGCCGAGGGC GAGATTCACG CCATCATCGG CCCGAACGGC GCGGGCAAGA CCACGCTGAT CCACCAGCTG TCGGGCAGCC TCGCGCCCGA TGCGGGGCGG ATCCTCCTTG GGGGCGAGGA CATCACCCGC CTTCCCATGG CGGCCCGGGC GCGGCGGGGT CTGGCGCGGT CGTTCCAGAT CACCTCGATC CTGCCGGGCT TCACCGCCCT CGAGAATGTG GCGCTGGCGG TGCAGGCGCG CTCGGGATCG AGCTTCCGCT TCCTCCGCCC GGCCGCGTCC GAACGTGCGC TGAACGAGGC CGCGGCTGCG GCGCTGGCCG CGGCGGGGCT CTGCGGGGCC GAGGGTCGGA TCGCGGGCAC GCTCTCGCAC GGCGAGAAGC GGCAGCTCGA GATCGCCATT GCGCTGGCGA TGCAGCCGAA GGTTCTGCTC CTTGACGAGC CGCTGGCGGG CACCGGCCAC CGCGAAAGCG CGGCGCTGCT TCAGCTGATT GCGGGCCTCA AGGGGCGGCT CTCGATCGTC CTGATCGAGC ATGACATGGA GGCGGTCTTC GCTCTGGCCG ACCGGATCAG CGTTCTGGTC TATGGCCGGG TGATCGCCAC CGGGCGCCCG GAGGCGATCC GGGCGGATGC CGAGGTGCGC GCGGCCTATC TGGGCGATGA GGAGGAGAGC TGA
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Protein sequence | MTPALSVRGL SKSFDALKVS DAITFDLAEG EIHAIIGPNG AGKTTLIHQL SGSLAPDAGR ILLGGEDITR LPMAARARRG LARSFQITSI LPGFTALENV ALAVQARSGS SFRFLRPAAS ERALNEAAAA ALAAAGLCGA EGRIAGTLSH GEKRQLEIAI ALAMQPKVLL LDEPLAGTGH RESAALLQLI AGLKGRLSIV LIEHDMEAVF ALADRISVLV YGRVIATGRP EAIRADAEVR AAYLGDEEES
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