Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3266 |
Symbol | |
ID | 5086015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 134423 |
End bp | 136570 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640484838 |
Product | hypothetical protein |
Protein accession | YP_001169455 |
Protein GI | 146279297 |
COG category | [R] General function prediction only |
COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.491727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGGA TGTCCGATGC CGGTCCCGTC GTCGTCGCGG AAGGTGTCGA TGACGAACCC TTGTCCGCGA ACCAGCGCGC CTTCGGCAGC CGCCTCAACC ATGGCGTGAC GCTGCTCTGC GCGCTCTACA CCGCCTTCCA CATCGTGGTG ATGAACTTCT ATCCGCTGGA GACCTGGACC TACCGGATGC TCCATATCGC GGGGGGGCTG GTCATCGGCT TCGTGATCTA CGCGGCGCTC CTGCTGCAGT CCGAGGATGA CCGGCCGCGG CGGAGCCTTG CGGAATGGGC GGTGATCGGG CTTGCGGCGG CCGGCGTGGT CTATGGCGCG GCGATGGTGG CCTATGCCTG GGCGGCCTGG TGGGTGGCGG GCGTGGCGCG TCCCCCGGCC TTCGTCTTCC AGACCTACGG CTGGCCGCTG ATCCTGGGCA CCCTCGCCGC CATCGCGGCG GGCTGGGTCT GGGGCGGGCG CGACCGCAGC CGGGTCCATC CGGCCGACTG GCTGCTGGCG CTGTCGGCGC TGGCGATGAC CGGCTACATC CTCTTCAACG TGGGGCCGAT CCGGCTCCGG GCCGGCACCG CGATGGCCCA GCCCGCCGAT TTCCACGCAG CCCTCGTGGG GGTGCTGCTG ATCCTGGAAC TCACCCGCCG GGTGGCGGGA CTGGCGCTGG TGATCATCGC CTCGGTCTTC ATCGCCTATT CGTTCCTCGG GCCCTACCTG CCCGGCTTCC TCACCCATCG CGGCTATGAC CCGCAGCGCT TCTTCACCTA CATCTTCACC GATCAGGGGA TTCTCGGCGC ACCGATTGCG GTCTCATCGA CCTACATCAT CCTGTTCATC GCCTTTGCGG CCTTCCTGCA GGCCAGCCGC GTCGGCGAGT ATTTCGTCAA CTTCGCCTTC GCCGCAGCCG GCCATCTGAG GGGCGGCCCG GCCAAGGTCG CGATCTTCGG GTCGGGCCTG ATGGGGATGA TCAACGGCAC CTCGGCGGGC AATGTGGTGG CGACCGGATC GCTCACCATC CCGCTGATGA AGAAGGTGGG CTATCCGGCG AAAAGCGCCG CCGGCATCGA GGCGACGGCC TCGTCGGGCG GCCAGATCCT GCCGCCGATC ATGGGCGCGG GCGCCTTCAT CATGGCCGAG GTCACCGGCA TACCCTACAC CGAGATCGTG GTGGCGGCGA TCATCCCGGC AGTGCTCTAC TTCGTCTCGG TCTATTTCAT GGTCGATTTC CAGGCCCGGA AGCTCGACAT GAAGGGCCTG CCCAAGGACC AGCTGCCGAA GTTCGCGGTT CTGGCACGGC AGATCTACCT CTTCCTGCCG ATCGTGATCC TGATCTACAC GCTCTTCGCC GGCTATACGG TGATCCGCGC GGGCACGGTG GCGATGGCCT CGGCGGCGGT GGTCTCCTGG CTCACGCCCT ACCGGATGGG GCCGGGCGCG ATCTACCGCG CGCTCGACTT GGCCGCCCGG ATGTCGATCC AGCTGGTCGC CGTCTGTGCC GCCGCGGGGA TCATCGTGGG GGTGATCGCG CTGACCGGCG TGGGCGCGCG CTTTTCCTCG CTTCTGCTGG GGCTCGCCGA CCAGAGCCAG GTGATCGCGC TGTTCTTCGC CATGATCATC TCGATCGTGC TGGGGATGGG GATGCCGACG ACGGCCGCCT ATGCGGTGGC GGCGGCGGTG GTGGCTCCGG GCCTGATCCA GCTGGGCATC CCGCCGCTGG TCGCGCATTT CTTCGTCTTC TACTACGCGG TCATGTCGGC CATCACGCCC CCTGTCGCGC TGGCCGCCTA TGCCGGGGCG GCCATCTCCG GATCCGAGCC GATGCGGACC TCGGTCGAGG CCTTCAAGCT GGGCCTTGCC GCCTTCATCG TGCCCTTCAT GTTCTTCAAC TCGCACGAGT TGCTGATGCA GGGCGAGTGG GCGGCGATCC TGCATGTGTT CCTCAGCGCC TGCCTTGGGG TGCTGCTGCT GTCGGCGGCG GTGCAGGGCT GGCTCTTCGG GCGGCTGAAC GGGGTCCTGC GGCTGCTGCT GCTGGGCGCC GCGCTGGCGA TGATCGACGG CGGCTGGCTG ACCGATGCGA TCGGGATCGC TGCGGCCGGG CTGGTGGCGC TCCTGCAGCG CCGCGCACCG TCCACCGCCA GCCTCTGA
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Protein sequence | MSRMSDAGPV VVAEGVDDEP LSANQRAFGS RLNHGVTLLC ALYTAFHIVV MNFYPLETWT YRMLHIAGGL VIGFVIYAAL LLQSEDDRPR RSLAEWAVIG LAAAGVVYGA AMVAYAWAAW WVAGVARPPA FVFQTYGWPL ILGTLAAIAA GWVWGGRDRS RVHPADWLLA LSALAMTGYI LFNVGPIRLR AGTAMAQPAD FHAALVGVLL ILELTRRVAG LALVIIASVF IAYSFLGPYL PGFLTHRGYD PQRFFTYIFT DQGILGAPIA VSSTYIILFI AFAAFLQASR VGEYFVNFAF AAAGHLRGGP AKVAIFGSGL MGMINGTSAG NVVATGSLTI PLMKKVGYPA KSAAGIEATA SSGGQILPPI MGAGAFIMAE VTGIPYTEIV VAAIIPAVLY FVSVYFMVDF QARKLDMKGL PKDQLPKFAV LARQIYLFLP IVILIYTLFA GYTVIRAGTV AMASAAVVSW LTPYRMGPGA IYRALDLAAR MSIQLVAVCA AAGIIVGVIA LTGVGARFSS LLLGLADQSQ VIALFFAMII SIVLGMGMPT TAAYAVAAAV VAPGLIQLGI PPLVAHFFVF YYAVMSAITP PVALAAYAGA AISGSEPMRT SVEAFKLGLA AFIVPFMFFN SHELLMQGEW AAILHVFLSA CLGVLLLSAA VQGWLFGRLN GVLRLLLLGA ALAMIDGGWL TDAIGIAAAG LVALLQRRAP STASL
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