| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3213 |
|---|
| Symbol | |
|---|
| ID | 5085962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | - |
|---|
| Start bp | 74946 |
|---|
| End bp | 75638 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640484785 |
|---|
| Product | NAD-dependent deacetylase |
|---|
| Protein accession | YP_001169402 |
|---|
| Protein GI | 146279244 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCGA TCTTCATCCT CACCGGGGCC GGCATATCGG CGGAAAGCGG GCTCGGCACC
TTCCGCGACA AGGACGGGCT CTGGACACGC TACGATCTCC GCCGGGTCGC CACGCCGGAA
GGGTTCCGCG ACGATCCCGC GCTCGTGCAT GACTTCTACA ACATGCGTCG GCGAAACTGC
CTTGAGGCCA CGCCGAACGC CGCCCACGAG GCGCTGGCCC GGCTGCAGCG CCAGCGGCCG
GGCCGCGTGA CGCTGGTCAC GCAGAATGTC GATGACCTGC ACGAGCGCGC AGGGTCGCCC
GAGGTGATCC ACATGCACGG CGAGCTGCTG GGCGCCCTCT GCGCGGCCTG CGGCCACCGC
TGGCACGCGC CCGAGCGGAT GGCGGCCGAT GACCCCTGCC CCGCCTGCGC CCGGCCCGCG
ACGCGGCCCG ACATCGTCTG GTTCGGCGAG ATCCCCTACC GCATGGACGA GATCCTCGAG
CGGCTGTCCC GTGCCACGCT CTTTGCCGTC ATCGGCAGCT CGGGCGAGGT CTATCCGGCG
GCAGGCTTTG TCGAGGAAGC GGCTGCACGC GGCATCGCCA CCATCGAGAT CAATCTCGAA
CCCGGCAGCC GCAGGGATCT CTTCGATCGC GGCCTCCATG GCCCCGCAAG CGAGACAGTG
CCGCGCTGGG TGGAGGAGCT GCTGCAGGCG TGA
|
|---|
| Protein sequence | MDSIFILTGA GISAESGLGT FRDKDGLWTR YDLRRVATPE GFRDDPALVH DFYNMRRRNC
LEATPNAAHE ALARLQRQRP GRVTLVTQNV DDLHERAGSP EVIHMHGELL GALCAACGHR
WHAPERMAAD DPCPACARPA TRPDIVWFGE IPYRMDEILE RLSRATLFAV IGSSGEVYPA
AGFVEEAAAR GIATIEINLE PGSRRDLFDR GLHGPASETV PRWVEELLQA
|
|---|
| |