Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3134 |
Symbol | |
ID | 5083086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 3210881 |
End bp | 3211435 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640484706 |
Product | hypothetical protein |
Protein accession | YP_001169323 |
Protein GI | 146279164 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.408769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000561841 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCTTCC ATCGCCTCGC GCGCGCCGCC CTTCCGGTCG GGCTTGCGCT TTCGCTCTCG GCCTGCGGCG GCATGACGGG CGAGGGAAAC AGCGGCTTCA CGGGCGGCGG GGCCGAGCGG CAGGTGGAGG CGGCGGCGGC CCAGCGGCAG GCGGAGTTCG CCGAGCGCAA CCGCGGCGCC ACGGTGGCCG GCGCCAACAG TGGAAGCCGT TCGAGCCTGT GGGACCTGTT CGGCACCAAG GACAACCCCG ACACCACCGT CGAGGTGAAC AAGTACATCT GGAACGCCGC GCTCGAGGTG CTGAACTTCC TGCCGGTGCA GTCGGTCGAT CCCTTCACCG GGGTGATCTC GACCGGCTAT GGCGTGCCGC CGGGCGGCGG GCGGGCCTAC CGCGCGACCG TCTATGTGCA GGATCCGGCG CTCGATGCGC GCTCGCTCAA GGTGGCGTTG CAGGGGCAGG GCGGCGGTCC GGTCTCGGCC GAGACCCAGC GTGCGGTCGA GGATGCGATC CTGACCCGGG CTCGGCAGCT CCGCCTGCGC GACTCGCGTC TCTGA
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Protein sequence | MSFHRLARAA LPVGLALSLS ACGGMTGEGN SGFTGGGAER QVEAAAAQRQ AEFAERNRGA TVAGANSGSR SSLWDLFGTK DNPDTTVEVN KYIWNAALEV LNFLPVQSVD PFTGVISTGY GVPPGGGRAY RATVYVQDPA LDARSLKVAL QGQGGGPVSA ETQRAVEDAI LTRARQLRLR DSRL
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