| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3112 |
|---|
| Symbol | |
|---|
| ID | 5083310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 3191427 |
|---|
| End bp | 3192122 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640484684 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169301 |
|---|
| Protein GI | 146279142 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.108531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00759909 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCGC TGGCGCTGCT GCTGGCGGCG CCCGCCGCTG CACGGACGGA CGAGGCCGCG
TTCGATCTCG TGCTCCGCGG CGTGAGGGCT GGAACCTTCT CGTTCAGTGG CGCCGAAGAG
GCGGGACGCT ACAGCGTCAA CGGGCGGCTG CAGAGCGGGG GTCTGCTCGG GCTGGTCCGC
AGGATGCGCT ACGATGCGCA GGCGAGCGGG CGGATGGTGC AGGGCCGCCC CGAGGCGCTC
AGCTACAGCG AGAAGGCCGA CACCGGGCGG CGGCAGTCCG AGGTGGTCCT GGCCTGGGAC
CGGGGCAGGC CGAGGGTCGA ACGGTACGCG CCCGCGCGCA AGCCCCGCCC CTATGACGTG
GATCCGGCGG CGCAACGTGG CACGGTGGAC CCGATGACGG CCCTCTATGC CGCTCTCCGG
GATGTCGAGC CGGGGCAGGA ATGCCGGCTG TCGCTGGACA TCTTCGACGG GCGTCGGCGG
ACGCAGGTGG TGCTGGGCAC ACCGAAGGCG AGCGAGGGCG GCGTGAGCTG CGCGGGCGAG
TTCCGGCGCG TGGCGGGCTA CTCGCCCGAG GACATGGCCG AAAAGCCACG CTTTCCCTTC
ACGCTCTACT ACCAGCCGAC CGCCGACGGA CGGATGCGCG TGATGCAGGT GGCAACGGAC
ACGATCTACG GCAAAGCCAC CCTGCGGCGG CGCTAG
|
|---|
| Protein sequence | MAALALLLAA PAAARTDEAA FDLVLRGVRA GTFSFSGAEE AGRYSVNGRL QSGGLLGLVR
RMRYDAQASG RMVQGRPEAL SYSEKADTGR RQSEVVLAWD RGRPRVERYA PARKPRPYDV
DPAAQRGTVD PMTALYAALR DVEPGQECRL SLDIFDGRRR TQVVLGTPKA SEGGVSCAGE
FRRVAGYSPE DMAEKPRFPF TLYYQPTADG RMRVMQVATD TIYGKATLRR R
|
|---|
| |