Gene Rsph17025_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3000 
Symbol 
ID5084600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3064661 
End bp3066190 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content69% 
IMG OID640484572 
Producthypothetical protein 
Protein accessionYP_001169191 
Protein GI146279032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.132597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0628081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTATT TCTGGACACT GGCTGGCACA ACCGCCCTTG CGACGCTGGT CGCGGCGGGT 
TCGGCTTCGG CCGATGTGAC GCCCGAGCAG GTGTGGCGGG GCTGGCAGGA GCTCGGCGCC
ACCTATGGCC AGACCCTGAC CGCCGCGAAC CAGAGCCGCA CGGGCAACAC GCTCCGGCTG
CAGGATGTCC GCCTCCATCT CGCGCAGGAC GGCACCGTGA TGGAGAGCAC GATCCCCGAG
GTGAACATGA CCCAGCGCGG CGACGGCAGC GTGGAGATCA CCATGTCGCC GGAGTTCCCC
GTCGCAATGA CGATCCCGAA CGAGCCCGAG GCCGAGAACC CTGCGCCCGA GCCGACGCGG
CTGGGGCTTG CCATGCGGCA GCCGGGCATG GTCATGGTGG CCAGCGGCGA CGATCGGGTT
TCGACGCTGG CCTTCGACGC GCCCTCGACG ACGATCGCGC TGACCGAGGT GGATGGCGAG
CCGGCGCGCA GCCGGAACCT GCGGGCCGAG GTCACCTTGA GCGACGTGGC CGGCACCTAC
CGCACCGACG GCACCGGCAC GCGCACCATC ACCAACGATT TCACCGCCTC GGTGGCCGAG
ATGGTCCTGG CGATGACCGA CCCGGACCAG GGCGGCCGGC TGAACCTCCG CGCCAGCGCG
ACCGATCTCA AGGGCAGCTC GAGCGGGACC ATGGTGGGCC CGCTGGGCAT GACCGATCTT
GCGGCGGCGC TCCAGGGCGG CGCGGCCTCG AACGGCAGCT TCACCTACGG GCCGGCCACG
CTCGAGTTCG ATTTTGCCGA TGCGACCGAC ACGGCCAAGG GTTCGGCCAG CGCCGCGGGC
GGCAATCTCG ACGTGTCGAT GAGCGGGGAC AGCCTCGCCT ATGGCGGCGG CACGCGGAAC
GTGAACCTGA CGGTCAGCGG CAGCCAGATC CCGTTCCCGC AATTCAACAT GAGCTACGCC
GAAGCCGCCT TCCAGCTCGT CACGCCTGTG GTGAAATCCG AGGCCGCGCA GGACTTCCGC
CTGCTGACAA GGCTTGTGAA CCTCAAGGTG TCGGACGAGA TCTGGGCCAT GTTCGACCCG
CAGGAGCAGT TGCCGCGCGA TCCGGCGACG CTGGTGGTCG ATGCCCGGGG CAAGGCCCGG
CTGGATGTGG ACCTGATCGA CCCCAAGGCG ATGGAGGCGC TCGGCGACCG GGCGCCGGGC
CAGCTCGAGG CGCTGGACGT GGACGAGCTG AAGCTGACCA TCGCCGGGGC TGAACTGACC
GGCGACGGTG CCTTCACCTT CGACAACAGC GACTTGACGA CCTACGGCGG CATGCCCGCC
CCGACCGGCC AGCTCGACCT GAAGCTGGTG GGGGGCAATG CGCTCATCGA CCGGCTGGTG
AGCATGGGCC TCGTTCCGCA GGAGCAGGCG ATGGCCGCCC GCATGATGCT CGGCATGTTC
GCGCGCCCCG GCGAGAGCCG GGACACCCTG ACCTCGACGC TCGAGTTCCG GGACAAGGGG
TTCTACGCGA ACGGCCAGCG CCTGCAGTAG
 
Protein sequence
MKYFWTLAGT TALATLVAAG SASADVTPEQ VWRGWQELGA TYGQTLTAAN QSRTGNTLRL 
QDVRLHLAQD GTVMESTIPE VNMTQRGDGS VEITMSPEFP VAMTIPNEPE AENPAPEPTR
LGLAMRQPGM VMVASGDDRV STLAFDAPST TIALTEVDGE PARSRNLRAE VTLSDVAGTY
RTDGTGTRTI TNDFTASVAE MVLAMTDPDQ GGRLNLRASA TDLKGSSSGT MVGPLGMTDL
AAALQGGAAS NGSFTYGPAT LEFDFADATD TAKGSASAAG GNLDVSMSGD SLAYGGGTRN
VNLTVSGSQI PFPQFNMSYA EAAFQLVTPV VKSEAAQDFR LLTRLVNLKV SDEIWAMFDP
QEQLPRDPAT LVVDARGKAR LDVDLIDPKA MEALGDRAPG QLEALDVDEL KLTIAGAELT
GDGAFTFDNS DLTTYGGMPA PTGQLDLKLV GGNALIDRLV SMGLVPQEQA MAARMMLGMF
ARPGESRDTL TSTLEFRDKG FYANGQRLQ