Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3000 |
Symbol | |
ID | 5084600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 3064661 |
End bp | 3066190 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640484572 |
Product | hypothetical protein |
Protein accession | YP_001169191 |
Protein GI | 146279032 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.132597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0628081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTATT TCTGGACACT GGCTGGCACA ACCGCCCTTG CGACGCTGGT CGCGGCGGGT TCGGCTTCGG CCGATGTGAC GCCCGAGCAG GTGTGGCGGG GCTGGCAGGA GCTCGGCGCC ACCTATGGCC AGACCCTGAC CGCCGCGAAC CAGAGCCGCA CGGGCAACAC GCTCCGGCTG CAGGATGTCC GCCTCCATCT CGCGCAGGAC GGCACCGTGA TGGAGAGCAC GATCCCCGAG GTGAACATGA CCCAGCGCGG CGACGGCAGC GTGGAGATCA CCATGTCGCC GGAGTTCCCC GTCGCAATGA CGATCCCGAA CGAGCCCGAG GCCGAGAACC CTGCGCCCGA GCCGACGCGG CTGGGGCTTG CCATGCGGCA GCCGGGCATG GTCATGGTGG CCAGCGGCGA CGATCGGGTT TCGACGCTGG CCTTCGACGC GCCCTCGACG ACGATCGCGC TGACCGAGGT GGATGGCGAG CCGGCGCGCA GCCGGAACCT GCGGGCCGAG GTCACCTTGA GCGACGTGGC CGGCACCTAC CGCACCGACG GCACCGGCAC GCGCACCATC ACCAACGATT TCACCGCCTC GGTGGCCGAG ATGGTCCTGG CGATGACCGA CCCGGACCAG GGCGGCCGGC TGAACCTCCG CGCCAGCGCG ACCGATCTCA AGGGCAGCTC GAGCGGGACC ATGGTGGGCC CGCTGGGCAT GACCGATCTT GCGGCGGCGC TCCAGGGCGG CGCGGCCTCG AACGGCAGCT TCACCTACGG GCCGGCCACG CTCGAGTTCG ATTTTGCCGA TGCGACCGAC ACGGCCAAGG GTTCGGCCAG CGCCGCGGGC GGCAATCTCG ACGTGTCGAT GAGCGGGGAC AGCCTCGCCT ATGGCGGCGG CACGCGGAAC GTGAACCTGA CGGTCAGCGG CAGCCAGATC CCGTTCCCGC AATTCAACAT GAGCTACGCC GAAGCCGCCT TCCAGCTCGT CACGCCTGTG GTGAAATCCG AGGCCGCGCA GGACTTCCGC CTGCTGACAA GGCTTGTGAA CCTCAAGGTG TCGGACGAGA TCTGGGCCAT GTTCGACCCG CAGGAGCAGT TGCCGCGCGA TCCGGCGACG CTGGTGGTCG ATGCCCGGGG CAAGGCCCGG CTGGATGTGG ACCTGATCGA CCCCAAGGCG ATGGAGGCGC TCGGCGACCG GGCGCCGGGC CAGCTCGAGG CGCTGGACGT GGACGAGCTG AAGCTGACCA TCGCCGGGGC TGAACTGACC GGCGACGGTG CCTTCACCTT CGACAACAGC GACTTGACGA CCTACGGCGG CATGCCCGCC CCGACCGGCC AGCTCGACCT GAAGCTGGTG GGGGGCAATG CGCTCATCGA CCGGCTGGTG AGCATGGGCC TCGTTCCGCA GGAGCAGGCG ATGGCCGCCC GCATGATGCT CGGCATGTTC GCGCGCCCCG GCGAGAGCCG GGACACCCTG ACCTCGACGC TCGAGTTCCG GGACAAGGGG TTCTACGCGA ACGGCCAGCG CCTGCAGTAG
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Protein sequence | MKYFWTLAGT TALATLVAAG SASADVTPEQ VWRGWQELGA TYGQTLTAAN QSRTGNTLRL QDVRLHLAQD GTVMESTIPE VNMTQRGDGS VEITMSPEFP VAMTIPNEPE AENPAPEPTR LGLAMRQPGM VMVASGDDRV STLAFDAPST TIALTEVDGE PARSRNLRAE VTLSDVAGTY RTDGTGTRTI TNDFTASVAE MVLAMTDPDQ GGRLNLRASA TDLKGSSSGT MVGPLGMTDL AAALQGGAAS NGSFTYGPAT LEFDFADATD TAKGSASAAG GNLDVSMSGD SLAYGGGTRN VNLTVSGSQI PFPQFNMSYA EAAFQLVTPV VKSEAAQDFR LLTRLVNLKV SDEIWAMFDP QEQLPRDPAT LVVDARGKAR LDVDLIDPKA MEALGDRAPG QLEALDVDEL KLTIAGAELT GDGAFTFDNS DLTTYGGMPA PTGQLDLKLV GGNALIDRLV SMGLVPQEQA MAARMMLGMF ARPGESRDTL TSTLEFRDKG FYANGQRLQ
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