| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2979 |
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| Symbol | |
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| ID | 5085072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 3044754 |
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| End bp | 3045590 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640484551 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001169170 |
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| Protein GI | 146279011 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0583058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACA TGGGCGCTAC CTCTGGCCTC GGCTTCATGA AGATGCATGG GGCGGGCAAT
GATTTCGTGG TGATCGACTC GCGCGGGCGC GGGGCAGTCA TGTCGGCTGG CCTTGCGCGG
GCGCTGGGCG ACCGGCACCG CGGCGTGGGG TTCGACCAGT TGGCCGAGAT CCGCGACCAT
GAGGGCGCGG ATTTCGCGCT GGACTTCTGG AACTCGGACG GGTCCCGCGC AGGCGCCTGC
GGCAACGCGA CCCGCTGCGT CTGCGATTAC ATCATGCGGG ATCTGGGCCG GGACGCGGTG
GCACTGGTCA CCGCGCGCGG CCGTCTGCAC GCGGTGCGCC GGACGGACGG GCTGGTGTCG
GTGAACATGG GCGCGCCGCA GCTGCTGTGG TCCGAGATCC CGCTTGCCCG CGATGTTGTC
CCCGACAGCC TGCCTCTGGC CGGCGCACCG GCGGCGGTGG GGATGGGCAA TCCGCATTGC
ATCTTCTTTG TCGAAGATGC CGAGGCGGTC GATCTTGCGG GGCAGGGGGC GGCGGTCGAG
ACCGATCCGC TCTTCCCCGA ACGGACGAAC GTGGAGTTTG CGAGCCTCAT CGCGCCGGAC
CGGCTGCGGC TGCGCGTCTG GGAGCGCGGG GCGGGCATCA CGCTGGCCTG CGGCTCGGGG
GCCTGCGCGA CGGCGGTGGC CGCGGCCCGG CGCGGCCTGA CGGGACGGCA GGTGGTGCTC
GAGATGGACG GCGGCACGCT CGAGGTGGAC TGGCGCGAAG ATGGCGTCTG GCTTTCGGGC
CCCGTCGCCC ATGTCTTCGA GGGGCGGCTC TCGCCCGCGA TGATGGCGCT GGCATGA
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| Protein sequence | MMDMGATSGL GFMKMHGAGN DFVVIDSRGR GAVMSAGLAR ALGDRHRGVG FDQLAEIRDH
EGADFALDFW NSDGSRAGAC GNATRCVCDY IMRDLGRDAV ALVTARGRLH AVRRTDGLVS
VNMGAPQLLW SEIPLARDVV PDSLPLAGAP AAVGMGNPHC IFFVEDAEAV DLAGQGAAVE
TDPLFPERTN VEFASLIAPD RLRLRVWERG AGITLACGSG ACATAVAAAR RGLTGRQVVL
EMDGGTLEVD WREDGVWLSG PVAHVFEGRL SPAMMALA
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