Gene Rsph17025_2943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2943 
Symbol 
ID5084543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3002609 
End bp3003307 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content68% 
IMG OID640484514 
Producttwo component transcriptional regulator 
Protein accessionYP_001169134 
Protein GI146278975 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.723084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.121071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCCGT GCGTCCTTGC ACTCGATGAC GAGACCTCGG TGCTGACAGT GGTGCAGGAA 
GTGCTGGAAG AGCGCGTGTT CCGCGTGATC ACGGCCAAGA CCCTGGCGCA GTTCCGCCGG
ATCCACGCGC AGGAGCAGGT GGATCTCTTT CTGATCGACA CGTCGCTGCC GGACGGAAAC
GGGCTCTCGC TGGTGCGCGA ATTGCGGCAG GTCACGGATC GCGGCATCAT CCTTCTCGCG
CCCCGCCGCG ACGAAGGCGA TGGCGTCCTG GGGCTGGAGC TTGGCGCGGA TGACTCGCTC
ACCAAGCCGT TCCTCGGGCG GGAACTGGCT GCACGGGTCG GGGCGGTCTT CCGCCGGACG
GGCCGGGCGG CGGCCCTTCC CGCCGGGCGC CCCCGCGTCG ATCACGAATT CGAAGGCTAT
GGCATGAGCC TTCAGGCGCG GAAGGTCTGG TCATCCGACG GCGTCGAGAT CGAGCTGACC
ACCTCGGAGT TCGAGCTGCT GGCGGCGCTT CTGGCGCGGC GGGGGCAGGT TCTCAGCCGC
GACCAGATCA TGAACGCGAT CAAGGGGCGG AGCTGGGAGA GCTACGATCG CGTGGTGGAC
GGAATCGTCA GCCGGCTGCG CCGGAAGATG CCCTCGACGA AGAGCGGAAG CCACTTCATC
CGCACCGTCC ACGGGGTGGG CTACGCCTTC ACGGCCTGA
 
Protein sequence
MVPCVLALDD ETSVLTVVQE VLEERVFRVI TAKTLAQFRR IHAQEQVDLF LIDTSLPDGN 
GLSLVRELRQ VTDRGIILLA PRRDEGDGVL GLELGADDSL TKPFLGRELA ARVGAVFRRT
GRAAALPAGR PRVDHEFEGY GMSLQARKVW SSDGVEIELT TSEFELLAAL LARRGQVLSR
DQIMNAIKGR SWESYDRVVD GIVSRLRRKM PSTKSGSHFI RTVHGVGYAF TA