Gene Rsph17025_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2500 
Symbol 
ID5084851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2548595 
End bp2549383 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content62% 
IMG OID640484062 
ProductABC transporter related 
Protein accessionYP_001168693 
Protein GI146278534 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0972134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG TCATCGAACG TCAGATCGAC CGCAGCCACA TGCAGGTGAG CGACGAGGTT 
GCCATCCAGA TCAGCCAGAT GAACAAGTGG TATGGCAGCT TCCACGTCCT GCGCGACATC
AACATGACCG TCCACAAGGG CGAGCGGATC GTGATCTGCG GCCCCTCCGG CTCGGGCAAG
TCCACGCTGA TCCGCTGCAT CAACCGGCTG GAAGAGCACC AGTCCGGCCA GATCGTCGTG
GACGGGATCG AGCTGACCTC CGACCTCAAG AACATCGACA AGGTGCGCTC GGAAGTGGGC
ATGGTGTTCC AGCACTTCAA CCTGTTCCCG CATCTGACGA TCCTGGAAAA CTGCACCCTC
GCGCCGATCT GGGTCCGCAA GACGCCCCGG AAGGAGGCCG AGGAGGTGGC GATGCACTAC
CTCAAGAAGG TCAAGATCCC CGAGCAGGCG TACAAGTATC CGGGCCAGCT CTCGGGCGGC
CAGCAGCAGC GGGTGGCCAT CGCGCGCTCG CTCTGCATGA AGCCGCGGAT CATGCTCTTT
GACGAGCCGA CCTCGGCGCT CGACCCCGAG ATGATCAAGG AGGTGCTCGA TACGATGATC
GAGTTGGCCG AAGAGGGGAT GACCATGCTC TGCGTGACCC ACGAGATGGG CTTCGCGCAG
GCGGTGGCGA ACCGGGTGAT CTTCATGGAC CAGGGCCAGA TCGTCGAGCA GAACGAGCCG
GGCGAGTTCT TCCGCAACCC GAAGTCCGAG CGGACCAAGC TGTTCCTCAG CCAGATCCTC
GGGCACTGA
 
Protein sequence
MSEVIERQID RSHMQVSDEV AIQISQMNKW YGSFHVLRDI NMTVHKGERI VICGPSGSGK 
STLIRCINRL EEHQSGQIVV DGIELTSDLK NIDKVRSEVG MVFQHFNLFP HLTILENCTL
APIWVRKTPR KEAEEVAMHY LKKVKIPEQA YKYPGQLSGG QQQRVAIARS LCMKPRIMLF
DEPTSALDPE MIKEVLDTMI ELAEEGMTML CVTHEMGFAQ AVANRVIFMD QGQIVEQNEP
GEFFRNPKSE RTKLFLSQIL GH