Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2500 |
Symbol | |
ID | 5084851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2548595 |
End bp | 2549383 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640484062 |
Product | ABC transporter related |
Protein accession | YP_001168693 |
Protein GI | 146278534 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0972134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGAAG TCATCGAACG TCAGATCGAC CGCAGCCACA TGCAGGTGAG CGACGAGGTT GCCATCCAGA TCAGCCAGAT GAACAAGTGG TATGGCAGCT TCCACGTCCT GCGCGACATC AACATGACCG TCCACAAGGG CGAGCGGATC GTGATCTGCG GCCCCTCCGG CTCGGGCAAG TCCACGCTGA TCCGCTGCAT CAACCGGCTG GAAGAGCACC AGTCCGGCCA GATCGTCGTG GACGGGATCG AGCTGACCTC CGACCTCAAG AACATCGACA AGGTGCGCTC GGAAGTGGGC ATGGTGTTCC AGCACTTCAA CCTGTTCCCG CATCTGACGA TCCTGGAAAA CTGCACCCTC GCGCCGATCT GGGTCCGCAA GACGCCCCGG AAGGAGGCCG AGGAGGTGGC GATGCACTAC CTCAAGAAGG TCAAGATCCC CGAGCAGGCG TACAAGTATC CGGGCCAGCT CTCGGGCGGC CAGCAGCAGC GGGTGGCCAT CGCGCGCTCG CTCTGCATGA AGCCGCGGAT CATGCTCTTT GACGAGCCGA CCTCGGCGCT CGACCCCGAG ATGATCAAGG AGGTGCTCGA TACGATGATC GAGTTGGCCG AAGAGGGGAT GACCATGCTC TGCGTGACCC ACGAGATGGG CTTCGCGCAG GCGGTGGCGA ACCGGGTGAT CTTCATGGAC CAGGGCCAGA TCGTCGAGCA GAACGAGCCG GGCGAGTTCT TCCGCAACCC GAAGTCCGAG CGGACCAAGC TGTTCCTCAG CCAGATCCTC GGGCACTGA
|
Protein sequence | MSEVIERQID RSHMQVSDEV AIQISQMNKW YGSFHVLRDI NMTVHKGERI VICGPSGSGK STLIRCINRL EEHQSGQIVV DGIELTSDLK NIDKVRSEVG MVFQHFNLFP HLTILENCTL APIWVRKTPR KEAEEVAMHY LKKVKIPEQA YKYPGQLSGG QQQRVAIARS LCMKPRIMLF DEPTSALDPE MIKEVLDTMI ELAEEGMTML CVTHEMGFAQ AVANRVIFMD QGQIVEQNEP GEFFRNPKSE RTKLFLSQIL GH
|
| |