| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2465 |
|---|
| Symbol | |
|---|
| ID | 5083808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 2513924 |
|---|
| End bp | 2514751 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640484027 |
|---|
| Product | diguanylate phosphodiesterase |
|---|
| Protein accession | YP_001168658 |
|---|
| Protein GI | 146278499 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.897546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.419062 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGA AACGCAAACT GGATGCGGCT TCGCCGGGAG ACCCTCACGA TTTCGCAGCG
GACGGGATCG AGAGGCAAAC CCTGCGGATG GTGGAACAGG CCCTCCGGGC CGACCGGCTG
ATGCTGGCCT GGCAGCCCGT CGTGGTGGCG TCCGAGGCGG CGCGGACCGT CTTCCACGAA
GGGCTGATCC GGGTTCTGGA CGAAACGGGC CGCATCATTC CCGCCCGCGA CTTCATGTCG
GCCGTCGAGA CGCAGGACCT CGGTCGGCTC ATCGACTGCG CCTCGCTCGA GAAGGGTCTG
GCCACTCTTG CGCGCCATCC GGGGCTCAGG CTCTCGATCA ACATGTCGGC GCGCTCGATC
GGCCATGGCC GCTGGATGCA GATCCTGCAG GGCGCCCTGC GCGCCGACCC TAACCTCGGG
CCGCGGCTGA TCCTGGAGAT CACGGAAAGC TCGGCCATGG AGGTGCCGGA GCTTGTCCTG
CCCTTCATGG ACGCGTTGCA GCGCGCAGGC ATCTCCTTCG CCCTCGACGA TTTCGGCGCA
GGCTTCACCG CCTTCCGCTA TCTCAAGGAC TTCTTCTTCG ACATCATCAA GATCGACGGC
CAGTTCATCC GCAACATCCA CCGCGACCCC GACAACCAGG TGCTGACGCA GGCCATGCTG
TCGGTTGGCC GGCACTTCGA CATGCTCACG GTGGCCGAAA CCGTCGAGAC CGCCGAGGAG
GCCGAGTGGC TTCGTGCCGC CGGGGTGGAC TGCCTGCAGG GCTACCTCTT TGGCAGACCC
TGCACCCAGC CGGCCTGGCA GGCCACGGGC ACGCGCCTGA TCGCCTGA
|
|---|
| Protein sequence | MTQKRKLDAA SPGDPHDFAA DGIERQTLRM VEQALRADRL MLAWQPVVVA SEAARTVFHE
GLIRVLDETG RIIPARDFMS AVETQDLGRL IDCASLEKGL ATLARHPGLR LSINMSARSI
GHGRWMQILQ GALRADPNLG PRLILEITES SAMEVPELVL PFMDALQRAG ISFALDDFGA
GFTAFRYLKD FFFDIIKIDG QFIRNIHRDP DNQVLTQAML SVGRHFDMLT VAETVETAEE
AEWLRAAGVD CLQGYLFGRP CTQPAWQATG TRLIA
|
|---|
| |