| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2448 |
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| Symbol | |
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| ID | 5084837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2497847 |
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| End bp | 2499112 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640484010 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001168641 |
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| Protein GI | 146278482 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.147668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.347917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCATT TCCTCTACCG CAACGGGTCG CTCCACGCCG AGGAGGTGCC GCTGGCCGAT
ATCGCCGCCA CCGTGGGCAC CCCCTTCTAC TGCTATTCCG CGGCCACGCT CGAGCGGCAC
TACCGGCTCT TCACCGAGGC GCTGACCCCG CTGCCGCACA TGGTCTGCTT CGCGATCAAG
TCGCTGTCGA ACCTCGCGGT GCTGAAGCTG CTGGGCGATC TCGGCGCGGG GATGGATGTG
GTCTCGGGCG GGGAATATCT GCGCGCGCGC GCCGCGGGCG TGCCGGGCGA GCGGATCGTC
TTTTCGGGCG TGGGCAAGAC GCGCGAGGAG ATGCGCCTCG CGCTCGAAGG CGGGATCCGC
CAGTTCAACG TGGAATCCGA GCCCGAGATG CGGGCGCTGT CCGAGGTGGC GGCCTCGATG
GACCTGCGCG CGCCCATCGC CGTGCGGGTG AACCCGGATG TGGATGCCCG CACGCACGAG
AAGATCGCCA CCGGCAAGAA GGAAAACAAG TTCGGCATCC CGATCGCGCG CGCCTCCGAG
GTCTATGCCG AGGCCGCGGC CCTGCCGGGG CTGGAGGTCG TGGGCATCGA CGTCCACATC
GGCTCGCAAC TGACCGACCT CGAACCGTTC GAGCAGGCCT ACCTCAAGGT CGCCGACCTG
ACCGGACGCC TGCGCGCCGA GGGCCATGAG ATCCGCCGGC TCGATCTTGG CGGGGGCCTC
GGCATCCCCT ACACCCGCTC GAACGAGGCC CCTCCCCTGC CGACCGATTA CGGCGCGCTG
ATCAAGCGCA CGGTCGGGCA TCTCGGCTGC GAGATCGAGA TCGAGCCGGG GCGGCTGATC
TCGGGCAATT CGGGCGTGCT GGTCAGCCGG GTCATCTATG TCAAGAACGG CGAGGGGCGC
GACTTCCTGA TCCTCGACGC GGCGATGAAC GATCTTGTGC GGCCTTCGAT GTATGGCGCG
CACCACGACA TCGTACCGGT GGCCGAGGCC GCACCGGGCA CCGAGGGCCA GCCCTACGAC
GTCGTGGGCC CGATCTGCGA GACGGGGGAC ACTTTCGCCA AGGCGCGTCC GCTGCCGCCC
ATGTCTGAGG GCGATCTGGT GGCCTTCCGC TCGGCCGGCG CCTACGGCGC GGTGATGGCC
TCGGAATACA ACTCGCGTCC GCTGGTGCCC GAGGTGCTGG TGCGCGGGGA TCACTTCGCC
GTCATACGGG CGAGACCGAC GTTTGACGAA ATGCTGAGGC GCGATAGCAT CCCTGAATGG
CTGTGA
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| Protein sequence | MDHFLYRNGS LHAEEVPLAD IAATVGTPFY CYSAATLERH YRLFTEALTP LPHMVCFAIK
SLSNLAVLKL LGDLGAGMDV VSGGEYLRAR AAGVPGERIV FSGVGKTREE MRLALEGGIR
QFNVESEPEM RALSEVAASM DLRAPIAVRV NPDVDARTHE KIATGKKENK FGIPIARASE
VYAEAAALPG LEVVGIDVHI GSQLTDLEPF EQAYLKVADL TGRLRAEGHE IRRLDLGGGL
GIPYTRSNEA PPLPTDYGAL IKRTVGHLGC EIEIEPGRLI SGNSGVLVSR VIYVKNGEGR
DFLILDAAMN DLVRPSMYGA HHDIVPVAEA APGTEGQPYD VVGPICETGD TFAKARPLPP
MSEGDLVAFR SAGAYGAVMA SEYNSRPLVP EVLVRGDHFA VIRARPTFDE MLRRDSIPEW
L
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