Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2345 |
Symbol | |
ID | 5084995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2389528 |
End bp | 2390031 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640483908 |
Product | Lipocalin family protein |
Protein accession | YP_001168539 |
Protein GI | 146278380 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.039817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCTCGAC TGAGGCTTCT GCCCCTGCTG CTGCTGGCCG CCTGCGCATC CCGCGCGCCG GAACCCCCTC CTGCCAGCTT CCGCGATGCG GGCCAGCCGA TCTGGTCGAA CGCGGTGTTC GAGCCGGCGC GCATCGCGGG CGAGTGGCGC GAGGTGGCGG CCTTCGCACC CCCCGGCGCC TGCCGTCCCG GCGGTGCCTC GATCCAGCCC GCGGCGGGAG GGCTCGAGAT CCGCGGGCGC CTCTGCCTTG GCGGGCGCGA GACCGCGCTT GCCGGTCCGC TGGACGTCAC CGGACCCGGC CGGCTTCTTC CTGCGGGGGG AACCGAGCCC TGGTGGGTGC TGTGGGTGGA TACGGACTAT CGCACCCTCG CCATCGGCAC GCCCTCGGGC CGGTTCGGCT TCGTGCTGAA CCGGGGCGGG CCGCTGCCGC CCGACCGTCT GACCGCGGCC CGCGAGATCC TCGAATGGAA CGGCTACGAC CTGGGGCGGT TGGCCCTGTT CTGA
|
Protein sequence | MSRLRLLPLL LLAACASRAP EPPPASFRDA GQPIWSNAVF EPARIAGEWR EVAAFAPPGA CRPGGASIQP AAGGLEIRGR LCLGGRETAL AGPLDVTGPG RLLPAGGTEP WWVLWVDTDY RTLAIGTPSG RFGFVLNRGG PLPPDRLTAA REILEWNGYD LGRLALF
|
| |