| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2333 |
|---|
| Symbol | |
|---|
| ID | 5084983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2379568 |
|---|
| End bp | 2380587 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640483896 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_001168527 |
|---|
| Protein GI | 146278368 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.409469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGCCG CGGCGACCGG GATCGGCATC GGCGCGGGCG CGCTGGACCT GCTGATGCCC
ATGCATCTGC GGCTCGATCC GTCGGGCGCC ATCTCGGGCT GCGGGCCGAC GTTGCGCAAG
CTGTTCCCCG AGCCTCCGCT GGGCCGGCCC TTCTTCCATC TCTTCGAGGT GTGCCGACCC
GCGGGGATCG AGACCACGTC CGCCCTCTCC GCCCGGTCCG GCACGCGGCT GCATCTGGCG
GCCCGCAACG GCAGCGGCGT GTGCCTGCGC GGCGTGGCCA CGCCGCTGCA CGACGGGCGC
GGCCTGCTGC TGAACCTCTC CTTCGGGATC TCGGTGCTCG AGGCCGTGCG CCGTCACGGG
CTGACGAACG GCGATTTCGC GGCAACCGAC CTGACGGTGG AACTGCTCTA TCTGGTCGAG
GCCAAGACCG CCGTCACCGA GGAACTCCAC CGCCTGAACC GTCGGCTCGA ACAGGCGCGC
CGCGCCGCCG AGGAAGAGGC GCTGACGGAC GAGTTGACCG GCCTGCGCAA CCGACGCGCT
CTCGATCAGG CGCTCGAGGC GGCGATCCTG ACGCGCCAGC CCTTCGGGCT GATGCATCTC
GACCTCGATT TCTTCAAGGA GGTGAATGAC AGCTTCGGCC ACGCCGCGGG CGATCATGTG
CTGCGAAGCG TGGCGCAGGT GCTCGCGCGC GAGACGCGCT CGGGCGATAC GGTGGCGCGG
ATCGGCGGCG ACGAGTTCAT GATGATCTTC CCCGGTGTCG CGGATGCCGA GCGTCTGCGG
AAGGTTGCGC GCCGGATGAT CGCCGAGGTG GACAAGCCGA TCCTGTTCGA GGGCCGCCCC
TGCCGCGTCG CGGCCAGCAT CGGCATGACG CTCTCGGTGC TCCATGATCC GCCGGAACCG
GCCCGGATCC TCGCCGATGC CGATGCCGCG CTTTATGCGG CCAAGCGGGC GGGCAGGGGG
GTGGCGGTCA TGCGACAGGT CGGAGGCCGG CGGCCGGCCG GCGCGCAGCC GGGCCCCTAG
|
|---|
| Protein sequence | MGAAATGIGI GAGALDLLMP MHLRLDPSGA ISGCGPTLRK LFPEPPLGRP FFHLFEVCRP
AGIETTSALS ARSGTRLHLA ARNGSGVCLR GVATPLHDGR GLLLNLSFGI SVLEAVRRHG
LTNGDFAATD LTVELLYLVE AKTAVTEELH RLNRRLEQAR RAAEEEALTD ELTGLRNRRA
LDQALEAAIL TRQPFGLMHL DLDFFKEVND SFGHAAGDHV LRSVAQVLAR ETRSGDTVAR
IGGDEFMMIF PGVADAERLR KVARRMIAEV DKPILFEGRP CRVAASIGMT LSVLHDPPEP
ARILADADAA LYAAKRAGRG VAVMRQVGGR RPAGAQPGP
|
|---|
| |