Gene Rsph17025_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2218 
Symbol 
ID5084122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2252568 
End bp2253392 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content64% 
IMG OID640483781 
ProductABC transporter related 
Protein accessionYP_001168413 
Protein GI146278254 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAA TGGACATTGA GACGGCCCCG GCCGCAGCCG ACGCCCCCCG CATCGGCGGG 
GTTCTGATGG AGATGAGGAA CATCACCCTG CGCTTCGGCG GCGTGAAGGC GATCACCGAC
ATCAGCTTCG ACATCCGCGA GGGCGAGATC CGCGCCATCA TCGGCCCGAA CGGCGCGGGC
AAAAGCTCGA TGCTGAACGT GATCTCGGGC TTCTACGTCC CGCAGGAGGG CGAAGTCTGG
TTCAAGGGCA AGCGCCGCCC GCAGATGAAG CCCTACGAGG TCGCCCAGCA GGGCATCGCC
CGCACCTTCC AGAACATCGC CTTGTTCGAG GGAATGAGCG TGCTGGACAA CATCATGACC
GGGCGGCTCA CGCTGATGAA GACGGGCCTC TGGAGCCAGG CGCTCTGGTG GGGCCGCGCC
CAGGCCGAGG AGGTCGAGCA TCGCGCCAAG GTCGAGAAGA TCATCGACTT CCTGGAAATC
CAGCACATCC GCAAGACGCC GGTGGGCCGC CTGCCCTACG GCCTGAAGAA GCGGGTGGAG
CTGGCCCGCG CGCTGGCGAC CGAGCCGAAG CTCTTGCTTC TGGACGAGCC GATGGCGGGC
ATGAACGTCG AGGAGAAGGA GGACATGTGC CGCTTCATTC TCGATACCAA CGACGAGTTC
GGCACCACCA TCTGCCTGAT CGAGCATGAC ATGGGCGTGG TGATGGACCT GTCCGACCGG
GTCGTGGTCA TGGACTACGG CAAGAAGATC GGCGACGGCA CGCCCGACGA AGTGCGCAGC
AACCAGGCGG TGATCGAGGC CTATCTGGGG GTGCAGCATG ACTGA
 
Protein sequence
MNAMDIETAP AAADAPRIGG VLMEMRNITL RFGGVKAITD ISFDIREGEI RAIIGPNGAG 
KSSMLNVISG FYVPQEGEVW FKGKRRPQMK PYEVAQQGIA RTFQNIALFE GMSVLDNIMT
GRLTLMKTGL WSQALWWGRA QAEEVEHRAK VEKIIDFLEI QHIRKTPVGR LPYGLKKRVE
LARALATEPK LLLLDEPMAG MNVEEKEDMC RFILDTNDEF GTTICLIEHD MGVVMDLSDR
VVVMDYGKKI GDGTPDEVRS NQAVIEAYLG VQHD