Gene Rsph17025_2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2129 
Symbol 
ID5082908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2160686 
End bp2161105 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content66% 
IMG OID640483692 
ProductHNH endonuclease 
Protein accessionYP_001168325 
Protein GI146278166 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.830228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGAGT ATGATCAGGT CGTGCGCAGT CAGCGTGCGG CCTTCCGAAT ACCCTCCGTC 
GTGGTGCTCA AGGAGTTCGT GTCCCCCCAG AAGCGCGTGG CCTTCACGCG CTTCAATCTT
TTCCTGCGGG ACGAGTTCCG GTGCCAGTAT TGCGGCGCGA AGGGCGACCT GACCTTCGAC
CATGTCCTCC CCCGTGCCCG CGGCGGGGTG ACAAGCTGGC AGAACGTGGT GGCCGCCTGT
TCGTCCTGCA ATCTGCGCAA GGGGTCGAAG ACGCTGCGGC AGGCCGGCAT GCGCCTGTTC
CGCGCCCCGA AGGAGCCCAC GCCCGCCGAG ATGCAGCGCC ACGGCCAGCG CTTCCCGCCC
AACCACCTGC ACGAGAGCTG GCTCGACTAT CTCTACTGGG ATGCCGAACT CGAGGCTTGA
 
Protein sequence
MAEYDQVVRS QRAAFRIPSV VVLKEFVSPQ KRVAFTRFNL FLRDEFRCQY CGAKGDLTFD 
HVLPRARGGV TSWQNVVAAC SSCNLRKGSK TLRQAGMRLF RAPKEPTPAE MQRHGQRFPP
NHLHESWLDY LYWDAELEA