Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2121 |
Symbol | |
ID | 5082900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2153760 |
End bp | 2155877 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640483684 |
Product | integrase catalytic subunit |
Protein accession | YP_001168317 |
Protein GI | 146278158 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAATCT CTCCGGACAA GGTGTGGTGG ACGGCGACCG AGATTGCAGT TGCCAGACTG CCCGATCTGC CTACCAGCCA GAAGGGCGTC GATCTTCTGG CGAAGCGCCT TGGCTGGCGC GCGCAACCGA GCCTTGCTCG TCGGCGTGCC GGTCGCGGCG GTGGCTGGGA GTACAGCTGG CAGCTGTTCC CGCTGACCGC GCAGCGCCAG CTGCTCACCC ACGCCAAGCC GCCGGCCGCT GCGGTGCCTG CGGCGCATGT CGATCGGGAT GAGGCGTGGA GCTGGTATGA GACCCTGCCG CAGGCGGTGA AGGACAAGGC CGCGGCGCGG CTCGCGATCA TCCAGAAGGT CGAGGCTCTG GAGCCGATGG TCGGGCGCTA TCTGGCCGTG GATCAGGTGG CCCGGATCTC GAAGGCGGGC GAGCGCACGA TCTGGAACTG GCTGGGGCGG ATCGAGGGCG TGCGCCCCGA TGACCGGCTG CCCTATCTGG CGCCCCGCCA CCGGGCCTCC CAGGCGCGGA TCCGCACGAA GGACTGCGAT CCGGAGTTCA TGGACCTGCT CAAGTCCGAC TTCCTGCGGC TCGCGGGGCC GAGCTTCGCC ACGTGCTACC GCCGCCAGCT GCGGGTGGCG CAGGGCAGGG GGCTGGAGAC GCTGCCGCTG AAGACGGCGC AGCGCCGGCT GAACGCCACC GTGAGCCGGG TGACGCAGGT CCTCTGCCGC GAGGGCATCG AGAAGGTGAA GCGGCTCTAT CCGACGCAGC GGCGGGACAA GACGGCCCTG CATGCGCTGG AGGCGGTCAA TGCCGACTTC CACAAGTTCG ACGTTTTCGT GCGCTGGCCG GCCGAGGGAG GCCAGCCGTC GTTTGTGGGG CGCCCGCAGA TGGTGGCGTT CCAGGACATC TTCTCGGGGC GCATCCTCGC CTGGCGTGTG GACCAGACCC CGAACTCGAC GGCCGTGCTG CTCGCCGCCG GCGACATGAT CGAGGACTGG GGCATTCCCG TGCATGTGCT TCTCGACAAC GGGCGCGAGT TCGCGGCCAA GGTGGTGACC GGCGGCGCCG CGACCCGTTA CCGTTTCAAG GTCAAGGAGG ACGACGTTCC GGGCCTCTTC ACGGCCCTCG GCTGCGAGAT CCACTGGGCT ACGCCCTACA GCGGCCAGTC GAAGCCGATC GAGCGCGCCT TCCGCGACAT GTGCGATGCG ATCGCCAAGG ATCCGCGCTT CGACGGGGCC TGGACCGGCA ACAAGCCCGA GGCCAAGCCG GAGGACTATG GCAGCCGTGC CGTGGATCTC GAAGACTTCC TGCGGGTGCT GGCCGAGGGG ATCGAGGAGC ACAACACCCG GCAGGGGCGG CGGTCGGAAG TGGCCTATGG CCGGAGCTTC GCGGACGTCT TCGACGAGAG CTACGCGAGC GCCCCGATCC GGAAGGCGAC CGAGGCACAG CGCCGCCTGT GGTTGCTCGG CGCCGAAGGG CTGCGGCTCA ACACCCGGAC CGGCGAGATC GCCTTCCAGA ACAACCGCTA CTGGGCGGAG TGGATGCAGG ACGTGGCGGG CGAGCGCGTG GTGGCCCGCT TCGATCCTGC CGACCTCTGG TCGGGCCTGC ACCTCTACAG CCAGGACGGC GCCTATCTCG GCCATGCCCC GGCGACAGAC CGCAGCGGCT TCTTCGATCT GGAGGAGGCC CGCATCACGG CCCGCGCCCG CCGCGCCTGG CTGAAGGCCG AGAAGGAGGC CGCCAGCGCC CACCGCCGCT ACACCGCCGC CGAACTCGGC CGCCAGCTGG ACGAGGTGAG CCCGATCGAG CCGCCGAAGC CCGAGGCGAA GGTGGTCCGC ATGGTGAAGG CCAAGGCCAA GGGGCCTGCG CCGGCCACCG CGCAGCCCGC CGCCGCGCCG AAGGCCTCGG CCACCGTCAC CCCCCTTCCG CTCCGGCCGC AGGTGCCGGC TGCGGAGGAA GCCCCCCGCG TGCGCTTCAA GCGCGCGCTC GACCTCGAAC GCGCGCTCGA GCGTGGCGAG GAGATCACCC GCGATCAGCG CAAGTGGCTC GCGGGCTACC AGACCAGCTC GGAGTACCGC TCGGAGCTGA TGCTGTGGCG CGTCCACGGC GACCAGATGT TCGGATGA
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Protein sequence | MTISPDKVWW TATEIAVARL PDLPTSQKGV DLLAKRLGWR AQPSLARRRA GRGGGWEYSW QLFPLTAQRQ LLTHAKPPAA AVPAAHVDRD EAWSWYETLP QAVKDKAAAR LAIIQKVEAL EPMVGRYLAV DQVARISKAG ERTIWNWLGR IEGVRPDDRL PYLAPRHRAS QARIRTKDCD PEFMDLLKSD FLRLAGPSFA TCYRRQLRVA QGRGLETLPL KTAQRRLNAT VSRVTQVLCR EGIEKVKRLY PTQRRDKTAL HALEAVNADF HKFDVFVRWP AEGGQPSFVG RPQMVAFQDI FSGRILAWRV DQTPNSTAVL LAAGDMIEDW GIPVHVLLDN GREFAAKVVT GGAATRYRFK VKEDDVPGLF TALGCEIHWA TPYSGQSKPI ERAFRDMCDA IAKDPRFDGA WTGNKPEAKP EDYGSRAVDL EDFLRVLAEG IEEHNTRQGR RSEVAYGRSF ADVFDESYAS APIRKATEAQ RRLWLLGAEG LRLNTRTGEI AFQNNRYWAE WMQDVAGERV VARFDPADLW SGLHLYSQDG AYLGHAPATD RSGFFDLEEA RITARARRAW LKAEKEAASA HRRYTAAELG RQLDEVSPIE PPKPEAKVVR MVKAKAKGPA PATAQPAAAP KASATVTPLP LRPQVPAAEE APRVRFKRAL DLERALERGE EITRDQRKWL AGYQTSSEYR SELMLWRVHG DQMFG
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