Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2085 |
Symbol | |
ID | 5083544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2125737 |
End bp | 2129402 |
Gene Length | 3666 bp |
Protein Length | 1221 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640483648 |
Product | hypothetical protein |
Protein accession | YP_001168281 |
Protein GI | 146278122 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.553705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGGC TCTCCCTCGC GCTCCTGCTG CTCGTCGCGC TCGCCGCGCC CGCCCATGCC GGCCCGGTGG CCGCCGCCGT CGGCATGGTC TTCACCGCCA TATCGCAGTT TGCGGCCTCG AGCCTGCTGG CCGGCTTCCT CGTCCAGACC GCCTTCTCGG TCGGCCTGTC GATGCTGGCC CGCGCGCTGG GTCCGAAGGT CCGCGAGCCC GGCATCAAGA CGCAGGTCAC GCAGACCGGC GGGGACACGC CCCAGTCCTT CGTGCTCGGC TGGTCCGCGA CCGGCGGGCA GCTGATCGCG CCGCCGATGA GCCACGGGGA CAAGAACAGG TACCTCGTCT ATGTCGTGGC CCTGGGCGCC ATTCCCGGCC AGACGCTGAC CCGGCTGATC GTCAACGACG AGGTGGTGCC GATCTCCGCC ACGCCGGACG CGGACGGGCT GCGGCCCGTG ACCGGCTCCT TCGCCGGCTA CGTCCGGGTG CGGATCCACG ACGGCAGCCA GACCGCGGCC GATCCCTACC TGCGGTCGAA GTTCGGCGCC GACCCCGACC GGCCCTGGTC GGAGGACATG ATCGGCCGCG GCGTCCCCTA TGCGATCGTG GAGTTCAAGC ACAAGCGCGA GGTCTTCAAC AACCTGCCGT CCGTGCGGTG CGAGATCCAA GGCATCCCGC TTTACGATCC CCGCAAGGAC AGCAGCGCCG GTGGCTCCGG CAGCCAGCGG TGGGCAAGCC CCGCGACCTG GACGCCGACC ACGAACCCGA TCGTGATGGT CTACAACATC ATGCGGGGCA TCCGGCTGCC CGACGGCAAC AGCTGGGGCG GGGAATGCGC GGCCGGGGAT CTGCCGCTGG CCTCCTGGGC CGCCGCGATG AACGAGTGCG ACGTGGTGCC TGCCGGCGCC ACCGCCGCCC AGTATCGCGC CGGACTGGAG ATCTCGGTCG AGGAGGAGCC GGCCGATGTG ATCGAGGAGC TCCTGAAGGC CTGCTCGGGG CAGATCGTTG ACGTGGGCGG GACCTGGAAA GTGCGCGTGG GCGGGCCGGG CCTGCCCGTC CTCTTCATCA CCGACGAGGA TGTGCTGGCC GATCAGGACC AGGTGCTCGA GCCGTTTCCG GGCCTCTCCG ACACCTGGAA CGGGGTGCAT GCGGCCTATC CCGAGCCCGA CAGCCTCTGG GAGGTGAAGG ACGCGCCGCC CCGCTACAAC GCCGCCTTCG AGGCGGCCGA CGGCGGGCGC CGGCTGGTGG CCGACCTGCG CCTGCCCGCG GTGCCCTACC GGGCGCAGGT GCAGCAGCTG ATGGAGGGCT GGATCCGCGA GGAGCGCCGG TTCCTCCGGC ACCGGCTGGT GCTGCCCCCG GAGGCTGCCG TACTGGAGCC GCTCGATGCG ATCGGCTGGA GTTCGAGCCG GCATGGCTAT GCCGCCAAGA GCTTCGAGAT CTTCGAGATG TCCGACGATC TCATGACCCT GTCGCAGTCG GTGGGCCTGC GCGAGCGCGA CGCGGGCGAC TACAACTGGA CCGCCTCCGA CCTGCTGCCC TCGCCGATCG CGGCGCCCGG CGTCAGCGCG CCGCCGCCGA TCACGGTGCC GGCCTTTGCG GCCAGCGCCA CGGTGATCCG GAACGCCTCC GGGGTGGCGA CGCGGCCCGC GATCCTCATG ACCTGGACCG GGCAGGAGGC GGAGGACGCG CGGGGCCTGC AGTGGGAGGT CCGGGTGCAG GCGACGGCCG AGACGGTTGC GGCGGGCGCG GTCCTCGCGG TCGAGTCGGG CCGGGCGCTC GTGACGGAGG GCATCCTGCC GGAAACGGCC TACGACGTTC GCGCGCAGCT GGTTTCGGAG CGCGCGACGG TCTGGAGCGG CTGGATCAGC GTCACGACGC CGCCGGTGGA CTATCTCGAT TCCGCGCTCG CCGCGCGGCT GGCCGAACTC GACGCCTTGG CCGAGGCCGC CGCCGATCAG GCGCAGGACG CGGCGCTGGC GGCCCAAGGG GTGCGCGAGG ATCATGACGC GCTGGTGGCG GGGTTCGTCG GGACGCTGAC GGATGCCTTC GCGGGTGTGG ATGGGCAGAT TGCGACGATC ACGGCCAATG TAAACGAGAT CTTCGACGGT GACACCGGGC AGGTCAAAGC CTCGGCTCTC AGCGGCTATT ACTCGAAGGC CGCCACGGAC ACTGCTATCG CGGCGGCCCG GACCGCGCTG TCCGGGCAGA TCACCAGCGG CGACACCGCG CTGCAGGGCC AGATCACCAG CATCCTCGGC CTCACCATCA ACCCGTCGAG CGCGCTGGCG ACCGCGCTGA CGAGCCTGCA GAGCACGGTG GGGTCGCAGT CGGCGTCCAT CTCGGCGCAG GGCACCGCCC TTGCGACGCT GCAGGGCAAT GCCAGCGCCT CCTACGTCTT TCGCGTCAAG GCTGGAACCG CGGGCGCAGG GCTTGAGCTT GTTGCCGCCA CGAACCCGAA TGGCCCGGTC TCGGTGGCGC GCATCTCGGC GACCGACATC CTGCTCGACG GTTCGGTTAC GATGCCGCAG CTCGCCGTGA CTGACTTCAG CGGCAACCTG ATCATCAACG GGAGCATGCC CTACGGCGAC ACCCGCGGGT GGACGAGCAT GTCGAGCTAC CACACGGTGG CTGCGCGGGA CACCGAGTCC AGCATGAACG CGCTGAGGAC CGCCCCGACG CCACATGTCT TGCGTCTCGA TGCTTATGAC CCATCAACCA CCTATACGAT CCTGGCGGAT TTCCCTTGCA GCGCTGGTGA CAGGTTTTCT GTCTCTTACG CCTATGCGGG TGGCGGGACC GGCGTGAATG CCGGTATCGG TCTTCAGTTC CTTTTCTACG GCGAGGGTGG GGAATACATC GGCGCCATCA ACCGGGCGGT TACGGTTACA GGCACCATCT GGCAAAATTA CACGGCGAGC GTGGCCCCTG CCAGTGCGGT GAGCCGATGC CGGATCCGCG CCTACAGGTC AGCCGGTGGG GTTGGGGTCG GCTTCCTCAC CAACATGGAG GTCATCCGGC AGCGGTCCGG CGTCACCCTC CTCACGCCAA ACAGCGTGAC CACGGCACTG GTCAACACCG AGGACTTCGC CGCCAGCGGT CTCGCCGTCT TCGGTGGGGA GCTGCGGTCG GACAACTACA ACGCCGCGAC GGGCACCGGC TGGCAGCTCA CCAAGGCTGG TGGGCTGGTC GTCCCGAACG CCTCGATCGA CAACGCCAAG ATCGGAAGCG AGATCAGGTC CAACAACTTC GTGGCGGGCT CGTCCGGCTG GCGCATCCAG AAGAACGGCA CGGCCGAGTT CGACAGCGTG ATCATCCGTC GGCAGATGCG CGTGGCGACA GGCACGTTCT CGATAGACTG GACCCGGCCG GGTGTTGCTT CGACAGGCGA CTGGGACAGA GGCGGGGAGA TTGATACTGG CCACCCGGCT CCTCTGTGGA GCGAGTTGAA GAAGGTCTAC ATCGCAACGC TCGGCCTGAC GAACGATGCC GTGGCTACTG CTGACTTCCC TGAGATTGTG GATCAAGTCT GGTGGGACTG GAACGCAGAC ACGATCATCA ACCGCACGAC CTGGTTCGGC GGTGCCACGA TCCGGTTCAA GTGGGCATTC AGAGGTGACC AATACCTGAG ACGGATCCAG GGCGTCGTCC GCTGGTCTCT CTACGAGGTG ACGTAA
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Protein sequence | MKRLSLALLL LVALAAPAHA GPVAAAVGMV FTAISQFAAS SLLAGFLVQT AFSVGLSMLA RALGPKVREP GIKTQVTQTG GDTPQSFVLG WSATGGQLIA PPMSHGDKNR YLVYVVALGA IPGQTLTRLI VNDEVVPISA TPDADGLRPV TGSFAGYVRV RIHDGSQTAA DPYLRSKFGA DPDRPWSEDM IGRGVPYAIV EFKHKREVFN NLPSVRCEIQ GIPLYDPRKD SSAGGSGSQR WASPATWTPT TNPIVMVYNI MRGIRLPDGN SWGGECAAGD LPLASWAAAM NECDVVPAGA TAAQYRAGLE ISVEEEPADV IEELLKACSG QIVDVGGTWK VRVGGPGLPV LFITDEDVLA DQDQVLEPFP GLSDTWNGVH AAYPEPDSLW EVKDAPPRYN AAFEAADGGR RLVADLRLPA VPYRAQVQQL MEGWIREERR FLRHRLVLPP EAAVLEPLDA IGWSSSRHGY AAKSFEIFEM SDDLMTLSQS VGLRERDAGD YNWTASDLLP SPIAAPGVSA PPPITVPAFA ASATVIRNAS GVATRPAILM TWTGQEAEDA RGLQWEVRVQ ATAETVAAGA VLAVESGRAL VTEGILPETA YDVRAQLVSE RATVWSGWIS VTTPPVDYLD SALAARLAEL DALAEAAADQ AQDAALAAQG VREDHDALVA GFVGTLTDAF AGVDGQIATI TANVNEIFDG DTGQVKASAL SGYYSKAATD TAIAAARTAL SGQITSGDTA LQGQITSILG LTINPSSALA TALTSLQSTV GSQSASISAQ GTALATLQGN ASASYVFRVK AGTAGAGLEL VAATNPNGPV SVARISATDI LLDGSVTMPQ LAVTDFSGNL IINGSMPYGD TRGWTSMSSY HTVAARDTES SMNALRTAPT PHVLRLDAYD PSTTYTILAD FPCSAGDRFS VSYAYAGGGT GVNAGIGLQF LFYGEGGEYI GAINRAVTVT GTIWQNYTAS VAPASAVSRC RIRAYRSAGG VGVGFLTNME VIRQRSGVTL LTPNSVTTAL VNTEDFAASG LAVFGGELRS DNYNAATGTG WQLTKAGGLV VPNASIDNAK IGSEIRSNNF VAGSSGWRIQ KNGTAEFDSV IIRRQMRVAT GTFSIDWTRP GVASTGDWDR GGEIDTGHPA PLWSELKKVY IATLGLTNDA VATADFPEIV DQVWWDWNAD TIINRTTWFG GATIRFKWAF RGDQYLRRIQ GVVRWSLYEV T
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