Gene Rsph17025_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1955 
Symbol 
ID5082430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1995152 
End bp1995988 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content68% 
IMG OID640483517 
Productglycosyl transferase family protein 
Protein accessionYP_001168151 
Protein GI146277992 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5597] Alpha-N-acetylglucosamine transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.30232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.579699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATCTGG TTGCCGAAAC GCAGGCGGGC TCCGACCGGG CCTATGTCAC GCTTGTGACC 
AACGCCGACT ACGCGCTGGG TGCGCGGGCG CTGCTGCGCT CGCTCGCCCT CAGCGGCACC
GCGGCCGACC GCGTGGTGCT GCATACGGAT GTGCCGGAAG GGGCGCTGGC GCCGTTGCGG
GCGCAGGGGG CGCGGCTGGT GCGGGTCGCG CTTCTGCCCA CCTCGCCCGA GTTCAACGCC
ACCCACGCCC GCGACGCGCT GCATGCGCGG GCGGCCTTCA CCAAGGGGGG CAAGCCGCCC
TTCCACACGC CGCTCGACAA TTTCGCCAAG TTGCGGCTCT GGCAGCTGGT CGAATACCGC
TCGGTCGTCT TCATCGACGC CGACGCGCTG GTGCTGCGCA ACATCGACCG GCTGTTCGAA
TATCCCGAGT TCTGCGCCGC TCCGAACGTC TATGAGAGCC TGTCCGACTT CCACAGGATG
AACTCGGGCG TCTTCACCGC CCGCCCGTCG GAGGACACCT TCGCCCGGAT GCTGGCGCAC
CTCGACCGGC CGGGGGTGTT CTGGCGGCGG ACCGACCAGA GCTTCCTGCA GGAGTTCTTC
CCCGACTGGC AGGGCCTGCC GGTCTTCTGC AACATGCTCC AGTATGTCTG GTTCGCCCTG
CCCGACCTCT GGAGCTGGGA GCAGATCCGG GTCCTGCACT TCCAGTATGA AAAACCGTGG
CAGGAGCATG AGAAGGCCGA GCGGCTGCGT CCGCTGATCG ACCTGTGGCG CAGCTATGCG
GGCGACGGGC CGGTGCCCGA CCTTGCGGAC CTTCCCCGGC CATGCGCCTT GCGCTGA
 
Protein sequence
MDLVAETQAG SDRAYVTLVT NADYALGARA LLRSLALSGT AADRVVLHTD VPEGALAPLR 
AQGARLVRVA LLPTSPEFNA THARDALHAR AAFTKGGKPP FHTPLDNFAK LRLWQLVEYR
SVVFIDADAL VLRNIDRLFE YPEFCAAPNV YESLSDFHRM NSGVFTARPS EDTFARMLAH
LDRPGVFWRR TDQSFLQEFF PDWQGLPVFC NMLQYVWFAL PDLWSWEQIR VLHFQYEKPW
QEHEKAERLR PLIDLWRSYA GDGPVPDLAD LPRPCALR