Gene Rsph17025_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1947 
Symbol 
ID5082422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1987510 
End bp1988640 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content66% 
IMG OID640483509 
Productalcohol dehydrogenase 
Protein accessionYP_001168143 
Protein GI146277984 
COG category[C] Energy production and conversion 
COG ID[COG1062] Zn-dependent alcohol dehydrogenases, class III 
TIGRFAM ID[TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCC GTGCCGCCGT CGCCGTCGAG GCCGGCAAGC CGCTCGAGAT CATGGAGGTC 
AATCTCGAAG GACCGAAGGC CGGCGAGGTC ATGGTCGAGA TCAAGGCCAC CGGCATCTGC
CACACAGACG AGTTCACCCT GTCCGGCGCC GACCCGGAAG GCATGTTCCC GGCGATCCTC
GGCCACGAGG GCGCGGGCGT GGTGGTCGAA GTGGGGCCCG GCGTGACGAG CGTGAAGCCG
GGGGATCACG TCATCCCGCT CTACACGCCC GAGTGCCGGC AATGCCCGAG CTGCCTGAGC
CAGAAGACCA ACCTCTGCAC CGCGATCCGC GGGACGCAGG GGCAGGGGCT GATGCCCGAC
GGCACGAGCC GCTTCTCGAT GCTCGATGGC ACGCCGATCC TGCATTACAT GGGCTGCTCG
ACCTTCTCGA ACTACACGGT TCTGCCCGAG ATCGCGGTGG CCAAGGTCCG CGAGGACGCG
CCCTTCGACA AGATCTGCTA CATCGGCTGC GGCGTCACCA CCGGCATCGG CGCGGTGATC
AACACGGCCA AGGTCGAGAT CGGCGCCAAG GCGGTGGTCT TCGGGCTGGG CGGCATCGGG
CTGAACGTGA TCCAGGGGCT GAGGCTTGCC GGCGCCGACA TGATCATCGG CGTGGATCTG
AACAACGCCA AGAAGGAATG GGGCGAGCGG TTCGGCATGA CCCATTTCGT GAACCCGTCC
GAGATCGACG GGGACATCGT GGCCCATCTG GTGAATATGA CCAAGACGCC CTTCGACCAG
ATCGGCGGGG CCGACTACAC GTTCGACTGC ACGGGAAATG TGAAGGTGAT GCGGCAGGCA
CTGGAAGCGT GCCATCGTGG CTGGGGCCAG TCGATCGTGA TCGGCGTGGC GCCGGCGGGG
GCCGAGATCC AGACGCGGCC GTTCCAGCTG GTGACGGGGC GGGTCTGGAA GGGCTCGGCC
TTCGGCGGCG CGCGCGGGCG GACCGACGTG CCGAAGATCG TGGAATGGTA CATGGAGGGC
AAGATCCAGA TCGATCCGAT GATCACCCAC ATCCTGAGCC TCGAAGAGAT CAACAAGGGC
TTCGATCTCA TGCATGCGGG CGAGTCGATC CGCTCGGTCG TGGTGTTCTG A
 
Protein sequence
MRTRAAVAVE AGKPLEIMEV NLEGPKAGEV MVEIKATGIC HTDEFTLSGA DPEGMFPAIL 
GHEGAGVVVE VGPGVTSVKP GDHVIPLYTP ECRQCPSCLS QKTNLCTAIR GTQGQGLMPD
GTSRFSMLDG TPILHYMGCS TFSNYTVLPE IAVAKVREDA PFDKICYIGC GVTTGIGAVI
NTAKVEIGAK AVVFGLGGIG LNVIQGLRLA GADMIIGVDL NNAKKEWGER FGMTHFVNPS
EIDGDIVAHL VNMTKTPFDQ IGGADYTFDC TGNVKVMRQA LEACHRGWGQ SIVIGVAPAG
AEIQTRPFQL VTGRVWKGSA FGGARGRTDV PKIVEWYMEG KIQIDPMITH ILSLEEINKG
FDLMHAGESI RSVVVF