Gene Rsph17025_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1937 
Symbol 
ID5082412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1979276 
End bp1980004 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content74% 
IMG OID640483499 
ProductABC transporter related 
Protein accessionYP_001168133 
Protein GI146277974 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGG CCGGCCCGCC CGCGCTCGAG ATCACCGGCC TCAGCCACAA TTTCGGCGCG 
GTCCGGGCCC TGCGGGAGGT GAGCTTCACC GTCCCGCGGG GGGCCTTCGT GGCGCTTCTC
GGCGTGAACG GGGCGGGCAA GACCACGCTC TTCTCGCTCG TGACCCGTCT TTACGACTCC
ACGAGCGGGA CGATCCGCGT GGCGGGCTTC GACGCCCGCC GCCAGCCGGG CGAGGCGCTT
GCCCGGCTGG GCGTCGTGTT CCAGAGCCGG GCGCTCGACG CCGACCTGAC CCTGACGCAG
AACCTGCGCT ACCACGCGGC GCTGCACGGG ATTGGCCGAC GCGAGGCCGC GCCGCGCATC
GACGAGGTGC TGGCGCTGGT CAGTCTGTCG GACAAGGCGG GGGCGCGGGT GGCGACCCTG
TCGGGCGGCC AGCAGCGCCG CGCTGAGATC GCCCGCGCGC TTCTGCACCG GCCGGAACTG
CTGCTGCTGG ACGAGGCGAC GGCCGGGCTC GACCTGCGCT CTCGGGCCGA GGTTCAGACG
GTGGTGCGCG ACCTGATCGC GGGCGAGGGG GTCTCGGCGC TCTGGGCCAC GCACATGATG
GAGGAGATCG CGCCCGAGGA CCGTGTGGTG GTGCTGCACC GGGGCGAGGT CCGGCTGACG
GGGCGGGCCG CGGATCTGGG CGGAAGCCTG ACGCAGGGCT TCCTTGCGCT GACCGGAGAG
GGCGCATGA
 
Protein sequence
MTPAGPPALE ITGLSHNFGA VRALREVSFT VPRGAFVALL GVNGAGKTTL FSLVTRLYDS 
TSGTIRVAGF DARRQPGEAL ARLGVVFQSR ALDADLTLTQ NLRYHAALHG IGRREAAPRI
DEVLALVSLS DKAGARVATL SGGQQRRAEI ARALLHRPEL LLLDEATAGL DLRSRAEVQT
VVRDLIAGEG VSALWATHMM EEIAPEDRVV VLHRGEVRLT GRAADLGGSL TQGFLALTGE
GA