Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1819 |
Symbol | |
ID | 5083045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1860925 |
End bp | 1861662 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640483379 |
Product | ERF family protein |
Protein accession | YP_001168016 |
Protein GI | 146277857 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.176184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCC ACGCGGTCGC CAACGGAGCG ACGATCGAGA CCCTTGAACG CCTCATGTCG CTTCAAGAGC GCCACGCCGC GAATATGGCC CGCGCCGCAT TCGATAACGC GATTGCAGCC GCCAAAGCCG AAATCCCCCC GATCCGCAAA AACCGGAAGG TCGATTTCAA CTCCGCGAAA GGCCGGACGA CCTACGAGTT CGAAGACCTC GCGGAAATCG TTCGGACCGT CGATCCGATC CTGTCGCGGC ACGGGCTCTC GTACCGCTTC CGCACTCACG TCTCCGGGCA GAATGTGGAG GTGATCTGCA TCCTCTCCCA TCGCGACGGG CACTCCGAAG AGACGAGCCT GCCGGCGCAG GCGGACAACT CCGGATCCAA GAACGCGATC CAAGCGGTGG GCAGCACGCT GACCTATCTT CAGCGCTACT TGCTCAAGGC TGCGCTTGGT CTTGCGGTGT CATCCGATGA TGACGCACGC GCGGCTGCCG CTCACAACCC TGTGCAGGAA CTCACCGCCA GGCAGGCGGC CGAGCTGCGG TCGCTCATCC AGGAGACGGC CACTGATGAG GCAAAGTTCC TCGCCCATGC CGGTGCGCAG AGCGTGGAGG AGATCGACCC GCGCGCGTTC CCGAGGCTTC AACAGATGCT CCTCGCGAAG CGCCGCACCA TGGCCTCCGC CGCTCCGAAA ACCGCTGCAG TCGAAGACGC CGTCGTGATC GAGGAGGTCC GCAAATGA
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Protein sequence | MIAHAVANGA TIETLERLMS LQERHAANMA RAAFDNAIAA AKAEIPPIRK NRKVDFNSAK GRTTYEFEDL AEIVRTVDPI LSRHGLSYRF RTHVSGQNVE VICILSHRDG HSEETSLPAQ ADNSGSKNAI QAVGSTLTYL QRYLLKAALG LAVSSDDDAR AAAAHNPVQE LTARQAAELR SLIQETATDE AKFLAHAGAQ SVEEIDPRAF PRLQQMLLAK RRTMASAAPK TAAVEDAVVI EEVRK
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