Gene Rsph17025_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1716 
Symbol 
ID5083955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1764555 
End bp1766096 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content68% 
IMG OID640483275 
Producttrimethylamine methyltransferase 
Protein accessionYP_001167914 
Protein GI146277755 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5598] Trimethylamine:corrinoid methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGG TCACGGCACG CAGGGCGCGG GGTGGCGGCG GATCGGCGCG GCGGGCGGAG 
AGGACGGCGG TCAGCCTCGA GACGGCCCGA TTCATCACCC GCAACATCCC GAACTTCGAA
ATCCTGAACG AGGAGGCGCT CCAGATCATC GAATGGAACG CCGAGACGGT CCTCGAGGAG
ATCGGCGTCA ACTTCCTCGA GAATCCGGCG GCTTTGCAAC GGTGGCGCGA CGCCGGCGCC
GATGTGCGCG GCGAGCGGGT GCATATCCCG CGCGGGCTGG CGCGCAAGCT CTGCGCGACG
GCGCCGTCGA GCTTCACCCA GCACGCCCGC AACCCCGCCC GCAATGTCGA GATCGGCGGG
CGCAGCCTCG TCCTCGCCCC CGTCTATGGC CCGCCCTTCG TGCGCGACCA CGAGGGCGGG
CGGCGCTACG CCACGATGGA GGACTTCCGC AACTTCGTGA AGCTTGGCTA CATGTCGAAG
TGGCTGCACC ATTCCGGCGG CACGGTCTGC GAGCCGACCG ACGTGCCGGT GAACAAGCGT
CACCTCGACA TGCTCCATGC CCACATGACG CTCTCGGACA AGCCCTTCAT GGGCTCTGTC
ACCGAACCGT CGCGGGCCGA GGATTCGGTC GAGATGGCCA AGCTCCTGTT CGGCGCGGAG
TTCGTCGATC AGAACACGGT CATGACCTCG CTCGTGAACA TCAACTCGCC GCTCACCTTC
GACGCGACCA TGATGGGCGC GCTCGAGGTC TATGCGGCGG CCAATCAGGC GGCCATCGTC
TCGCCCTTCA TCGTGGGCGG TGCCATGGCC CCGGTGACGG TGGCGGGGAC GCTGACCCAG
GTGCTGGCCG AGGTGCTGGC CGGCGTGGCC TACAGCCAGC TCATCCGCCC CGGTGCCCCG
GTGATCTTCG GCGCCTTCGT GACCTCGATC GACATGAACT CGGGCGCCCC CACCTTCGGC
ACGCCCGAGG CCGCCCACAT CACCTACGGG GCCGGCCAGC TCGCCCGTCG GCTGGGTCTG
CCCTACCGCT CGGGCGGCTC GTTCTGCGGC TCGAAGCTGC CGGATGCGCA GGCCGCCTAT
GAGACGGCCA ACTCGCTCAA CGTGGCGCTC ATGTCGGGCG TGAACTTCAT GCTCCACGCC
TGCGGCTGGC TCGAGGGCGG GCTCGTCTCC TCCTACGAAA AGTTCGTAAT GGATGCCGAC
CAGCTGGGCA CGCTGCATCA TCTGGCGCAG GGCGTGGCGG TGGATGCGAA CGGGCAGGGG
ATGGATGCGA TCCGCGAAGT GGGTCCCGGC GGCCATTATC TCGGCTGTGC CCACACGCAG
GCCAACTTCA AGTCGGCCTT CTGGCGCTCG GACCTGTTCG ACTACAAGCC CTTCGAGACG
TGGGAGGAAG AAGGCGCGCG CGACACCGAA GTGCTTGCGG CCGCCCGGGT GAAGAAGCTT
CTGGCCGACT ACCAGAGGCC CGCACTCGAC GAGGCGGTGG CCGAATCCCT CTCCGCCTAT
GTGGCGCGCA AGAAGGAGGC GGCTCCCGAC GCCTTCATCT GA
 
Protein sequence
MNEVTARRAR GGGGSARRAE RTAVSLETAR FITRNIPNFE ILNEEALQII EWNAETVLEE 
IGVNFLENPA ALQRWRDAGA DVRGERVHIP RGLARKLCAT APSSFTQHAR NPARNVEIGG
RSLVLAPVYG PPFVRDHEGG RRYATMEDFR NFVKLGYMSK WLHHSGGTVC EPTDVPVNKR
HLDMLHAHMT LSDKPFMGSV TEPSRAEDSV EMAKLLFGAE FVDQNTVMTS LVNINSPLTF
DATMMGALEV YAAANQAAIV SPFIVGGAMA PVTVAGTLTQ VLAEVLAGVA YSQLIRPGAP
VIFGAFVTSI DMNSGAPTFG TPEAAHITYG AGQLARRLGL PYRSGGSFCG SKLPDAQAAY
ETANSLNVAL MSGVNFMLHA CGWLEGGLVS SYEKFVMDAD QLGTLHHLAQ GVAVDANGQG
MDAIREVGPG GHYLGCAHTQ ANFKSAFWRS DLFDYKPFET WEEEGARDTE VLAAARVKKL
LADYQRPALD EAVAESLSAY VARKKEAAPD AFI