Gene Rsph17025_1699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1699 
Symbol 
ID5083431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1744328 
End bp1746430 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content70% 
IMG OID640483257 
Productproton-translocating NADH-quinone oxidoreductase, chain L 
Protein accessionYP_001167897 
Protein GI146277738 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 
TIGRFAM ID[TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0618113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCC CCTATCTTCT CCTGCTCCTC GTGCCGGCGC CGCCGCTGGC CGTCTTCCTG 
ATCCTCGGCC TCGATCCGTT CTTCCTGCGC CGCAAGGCCG TGCAGGCGCT GGCGCTGCTG
GGGGGCATCG CGCCCTTCTT TGCCATGCTG CCTTTGCTGG GCCTGTGCCT GGGCACGGAA
TGCTACGGCG TCATGCCGAT CTTCACGCTG GTCTTCGGCC AGTCCGAGGT GGCGCTGGCG
CTGCTGCTCG ATCCGATGAG CACGCTGGTG GGCCTGACGG TCGCGGCGGT CGGCGCGCTC
GTGATCACCT ACGCCATCGA CTACATGTCG GATGCGCGCA TCGCCGACCT GCGCCGCTTC
TTCGCGCTGA TGAACCTGTT CCTCGCCGCC ATGCTGACGA TGGTGCTGGC GGGCGACACG
ATCACCTTCT TCTTCGGCTG GGAACTGATG GGGCTCTGCT CCTTCTTCCT CATCGCCTAC
AACACCAGCC TGCCGCAGGC GGTGGCCGCG GGCCGCAAGG CCTTCATCAT CACCCGCTTT
GCCGACGCCT TCCTGCTCGC GGGGCTGCTG CTTCTGTTCC TCGAGGCCAA CTCGGTCCGG
CTCGACGTGC TGATCCCGGC CGGGACGATG ATGACGGAGG AGCGCCATGT CGTGATCGCG
CTCCTGCTGC TCGCGGGCGC GCTCGGCAAG TCGGCGCAGG TGCCGTTCCA CACCTGGCTG
CCCTCGGCGA TGGCGGGGCC GACGCCGGTC TCGGCGCTGC TCCATTCGGC CACGATGGTG
GCGGCGGGCG CCTTCATGCT GGCGCGCTTC TCGCCCATCG TCATGTCCGA GCCGGCGGTG
CAGACCATCG CCGCGATCTT CGGCGCGGGC ACGGCGGCCT TCGGTGCGCT GTCGGCGATC
TTCCAGACCG ACGTGAAGCG GCTTCTGGCC TATTCCTCGA TCAGCCAGAT CGGCTTCATG
GTGCTGGCGA TCGGACTGGG CGCGCCAGAG GTGGCGATCG CGCATTTCGT CGTGCATGCG
ATGTTCAAGT CGCTCCTGTT CCTTGCGGCG GGCGACATCA CCCACGGGTC CGACCTCGGC
ACCAGCCTGC AGGCCATGCG CGGGGCGCTG CGGCGCCGGC CGATCAGCTT CCTTGCCTAT
GTCGCGGGCG CGGCCTCGCT GGCCGGCCTG CCCATCGTCA CCGCCGGCTG GTGGTCCAAG
GAGGCCATCC TCGCCACGGC CTGGGAGGGC GGCGCCTTCG GGATCGCGAT CTGGGTGCTG
GCGCTGCTGA CGGCGACCTG CACCGCCATC TACGCCTTCC GCCCGGTCTT CGAGGCGCTC
CAGCCCGAGC CCGCCCACAT CAGCCACGCC CGGCGGGGCC ATCCGGTCGC GCTCGACCTG
CATTACCGAC CGCGCTGGGG CAGCGGCTTC ATCATCCTGC CGCTCGTGCT GCTCGCCGCG
GGGTCGCTGC TCGGCGGGAT CATCGTGGGG CCGATCATCC GCTTCCTCGG GGCCGAGGCG
CCGCATCCCG CGCATCTGCC CGAGCTTGTG GCGGCGGTTG CCCCCTTCGT CGGCATGGCC
GGGGCCGCGG CCATCACCTT CGTCCCTGCC CTCGCCGCGG CCGTGGCGGG CGCGCGCGAC
ATGCGCCGGC CCACCCGGCT CGACCGCAAG TTCCAGCGCT GGGTGATCGA GCCCTACGTC
CGGCTCGTCC GCTTCCTCGC GGGCAACCGC ATCGGCGCGC GGGCCGAGGC CGAGCTTGAG
CTGCGCCACG TCCAGATCGT GCGCTGGCTG AGCCGGGGCG CACGGATGGA CGGGATCTAT
CAGGCGCTCT TCGTGCGGCC CTTCGTGAAC ATCGTCCGGT GGCTGAACGG CCATCGCGGC
GGCACGGTGG ACCCGGTGGG GACATTTCCG GTCAGCCTCG CGCTTCAGGG CACGCAGGCG
CTGGTGGAGC GGCTGGCGCA TGACCGGTTC GACCGGTTCT GGATGCGTCT GGCCAACCGG
CTGGTGCGGC TCTGGGTGCT GGTCTGCGCC ATCCAGACCG GACGGAGCCG GGATTATGCG
CTCGGCGCGG CCCTCGGTAC GGCCGCCCTT CTCGTGATTG CATGGGGTAC GACATGGAAC
TGA
 
Protein sequence
MLSPYLLLLL VPAPPLAVFL ILGLDPFFLR RKAVQALALL GGIAPFFAML PLLGLCLGTE 
CYGVMPIFTL VFGQSEVALA LLLDPMSTLV GLTVAAVGAL VITYAIDYMS DARIADLRRF
FALMNLFLAA MLTMVLAGDT ITFFFGWELM GLCSFFLIAY NTSLPQAVAA GRKAFIITRF
ADAFLLAGLL LLFLEANSVR LDVLIPAGTM MTEERHVVIA LLLLAGALGK SAQVPFHTWL
PSAMAGPTPV SALLHSATMV AAGAFMLARF SPIVMSEPAV QTIAAIFGAG TAAFGALSAI
FQTDVKRLLA YSSISQIGFM VLAIGLGAPE VAIAHFVVHA MFKSLLFLAA GDITHGSDLG
TSLQAMRGAL RRRPISFLAY VAGAASLAGL PIVTAGWWSK EAILATAWEG GAFGIAIWVL
ALLTATCTAI YAFRPVFEAL QPEPAHISHA RRGHPVALDL HYRPRWGSGF IILPLVLLAA
GSLLGGIIVG PIIRFLGAEA PHPAHLPELV AAVAPFVGMA GAAAITFVPA LAAAVAGARD
MRRPTRLDRK FQRWVIEPYV RLVRFLAGNR IGARAEAELE LRHVQIVRWL SRGARMDGIY
QALFVRPFVN IVRWLNGHRG GTVDPVGTFP VSLALQGTQA LVERLAHDRF DRFWMRLANR
LVRLWVLVCA IQTGRSRDYA LGAALGTAAL LVIAWGTTWN