| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1699 |
|---|
| Symbol | |
|---|
| ID | 5083431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 1744328 |
|---|
| End bp | 1746430 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640483257 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| Protein accession | YP_001167897 |
|---|
| Protein GI | 146277738 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0618113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGCC CCTATCTTCT CCTGCTCCTC GTGCCGGCGC CGCCGCTGGC CGTCTTCCTG
ATCCTCGGCC TCGATCCGTT CTTCCTGCGC CGCAAGGCCG TGCAGGCGCT GGCGCTGCTG
GGGGGCATCG CGCCCTTCTT TGCCATGCTG CCTTTGCTGG GCCTGTGCCT GGGCACGGAA
TGCTACGGCG TCATGCCGAT CTTCACGCTG GTCTTCGGCC AGTCCGAGGT GGCGCTGGCG
CTGCTGCTCG ATCCGATGAG CACGCTGGTG GGCCTGACGG TCGCGGCGGT CGGCGCGCTC
GTGATCACCT ACGCCATCGA CTACATGTCG GATGCGCGCA TCGCCGACCT GCGCCGCTTC
TTCGCGCTGA TGAACCTGTT CCTCGCCGCC ATGCTGACGA TGGTGCTGGC GGGCGACACG
ATCACCTTCT TCTTCGGCTG GGAACTGATG GGGCTCTGCT CCTTCTTCCT CATCGCCTAC
AACACCAGCC TGCCGCAGGC GGTGGCCGCG GGCCGCAAGG CCTTCATCAT CACCCGCTTT
GCCGACGCCT TCCTGCTCGC GGGGCTGCTG CTTCTGTTCC TCGAGGCCAA CTCGGTCCGG
CTCGACGTGC TGATCCCGGC CGGGACGATG ATGACGGAGG AGCGCCATGT CGTGATCGCG
CTCCTGCTGC TCGCGGGCGC GCTCGGCAAG TCGGCGCAGG TGCCGTTCCA CACCTGGCTG
CCCTCGGCGA TGGCGGGGCC GACGCCGGTC TCGGCGCTGC TCCATTCGGC CACGATGGTG
GCGGCGGGCG CCTTCATGCT GGCGCGCTTC TCGCCCATCG TCATGTCCGA GCCGGCGGTG
CAGACCATCG CCGCGATCTT CGGCGCGGGC ACGGCGGCCT TCGGTGCGCT GTCGGCGATC
TTCCAGACCG ACGTGAAGCG GCTTCTGGCC TATTCCTCGA TCAGCCAGAT CGGCTTCATG
GTGCTGGCGA TCGGACTGGG CGCGCCAGAG GTGGCGATCG CGCATTTCGT CGTGCATGCG
ATGTTCAAGT CGCTCCTGTT CCTTGCGGCG GGCGACATCA CCCACGGGTC CGACCTCGGC
ACCAGCCTGC AGGCCATGCG CGGGGCGCTG CGGCGCCGGC CGATCAGCTT CCTTGCCTAT
GTCGCGGGCG CGGCCTCGCT GGCCGGCCTG CCCATCGTCA CCGCCGGCTG GTGGTCCAAG
GAGGCCATCC TCGCCACGGC CTGGGAGGGC GGCGCCTTCG GGATCGCGAT CTGGGTGCTG
GCGCTGCTGA CGGCGACCTG CACCGCCATC TACGCCTTCC GCCCGGTCTT CGAGGCGCTC
CAGCCCGAGC CCGCCCACAT CAGCCACGCC CGGCGGGGCC ATCCGGTCGC GCTCGACCTG
CATTACCGAC CGCGCTGGGG CAGCGGCTTC ATCATCCTGC CGCTCGTGCT GCTCGCCGCG
GGGTCGCTGC TCGGCGGGAT CATCGTGGGG CCGATCATCC GCTTCCTCGG GGCCGAGGCG
CCGCATCCCG CGCATCTGCC CGAGCTTGTG GCGGCGGTTG CCCCCTTCGT CGGCATGGCC
GGGGCCGCGG CCATCACCTT CGTCCCTGCC CTCGCCGCGG CCGTGGCGGG CGCGCGCGAC
ATGCGCCGGC CCACCCGGCT CGACCGCAAG TTCCAGCGCT GGGTGATCGA GCCCTACGTC
CGGCTCGTCC GCTTCCTCGC GGGCAACCGC ATCGGCGCGC GGGCCGAGGC CGAGCTTGAG
CTGCGCCACG TCCAGATCGT GCGCTGGCTG AGCCGGGGCG CACGGATGGA CGGGATCTAT
CAGGCGCTCT TCGTGCGGCC CTTCGTGAAC ATCGTCCGGT GGCTGAACGG CCATCGCGGC
GGCACGGTGG ACCCGGTGGG GACATTTCCG GTCAGCCTCG CGCTTCAGGG CACGCAGGCG
CTGGTGGAGC GGCTGGCGCA TGACCGGTTC GACCGGTTCT GGATGCGTCT GGCCAACCGG
CTGGTGCGGC TCTGGGTGCT GGTCTGCGCC ATCCAGACCG GACGGAGCCG GGATTATGCG
CTCGGCGCGG CCCTCGGTAC GGCCGCCCTT CTCGTGATTG CATGGGGTAC GACATGGAAC
TGA
|
|---|
| Protein sequence | MLSPYLLLLL VPAPPLAVFL ILGLDPFFLR RKAVQALALL GGIAPFFAML PLLGLCLGTE
CYGVMPIFTL VFGQSEVALA LLLDPMSTLV GLTVAAVGAL VITYAIDYMS DARIADLRRF
FALMNLFLAA MLTMVLAGDT ITFFFGWELM GLCSFFLIAY NTSLPQAVAA GRKAFIITRF
ADAFLLAGLL LLFLEANSVR LDVLIPAGTM MTEERHVVIA LLLLAGALGK SAQVPFHTWL
PSAMAGPTPV SALLHSATMV AAGAFMLARF SPIVMSEPAV QTIAAIFGAG TAAFGALSAI
FQTDVKRLLA YSSISQIGFM VLAIGLGAPE VAIAHFVVHA MFKSLLFLAA GDITHGSDLG
TSLQAMRGAL RRRPISFLAY VAGAASLAGL PIVTAGWWSK EAILATAWEG GAFGIAIWVL
ALLTATCTAI YAFRPVFEAL QPEPAHISHA RRGHPVALDL HYRPRWGSGF IILPLVLLAA
GSLLGGIIVG PIIRFLGAEA PHPAHLPELV AAVAPFVGMA GAAAITFVPA LAAAVAGARD
MRRPTRLDRK FQRWVIEPYV RLVRFLAGNR IGARAEAELE LRHVQIVRWL SRGARMDGIY
QALFVRPFVN IVRWLNGHRG GTVDPVGTFP VSLALQGTQA LVERLAHDRF DRFWMRLANR
LVRLWVLVCA IQTGRSRDYA LGAALGTAAL LVIAWGTTWN
|
|---|
| |