Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1660 |
Symbol | |
ID | 5082738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1702641 |
End bp | 1703741 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640483218 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_001167858 |
Protein GI | 146277699 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.798759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGTC ACTTCTCGCT TGATACGATC CGCTCGCGGC CTCTGCCTCC TCCGGAAGGG TTGGTTGACA GGGTGATCCC CGGCGAGTCC GTCGCGATCC GCCGGGTCAA GCAGCTGATC GGAGCCGTCG CGATCAGCGA AGCGCCGGTT CTTGTGCGGG GCGCGACCGG GACGGGCAAG GAACTGGTGG CCGAGGCCCT GCACCGCGCG TCGGGCCGGG GCGGCAACCT TGTCGCCGTG AACTGCGCGG CCATCCCGGC CGAGTTGCTC GAATCCGAGC TGTTCGGCCA TGAGAAGGGC GCCTTCACCG GAGCCGAACG GCAGCGGATC GGCCGGATCG AGATGGCCCA CGGCGGCACG CTCTTTCTCG ACGAGATCGG CGACATGCCG CTCGCGCTTC AGGCCAAGCT GCTGCGCGTG CTTGAGAGCC GCCGGATCTC GCGCGTCGGG GGCACGGGCG AGATCGACGT GGATTTCCGT CTGGTGACGG CCACGCACCG CAATCTCGAT GCGCAGGTGG CCAAGGGCGG GTTCCGCAGC GACCTTTACT ACCGGATCAA CGTGTTCCCG CTCGAGCTGC CCGACCTGCG CGAGCGCACC TCGGACATCC CCCTGATCCT GGCCCGGATG CTCGACGATC ATCTGGCGCG CAATCCCGCG GCCGATCTGC CGCATTTCGA TGCCGGCGCA CTCCGGGCTC TGGGCGCGCA TGACTGGCCG GGCAATGTGC GCGAGCTGCG CAACGTGCTG GCGCGGGCTC TTGTGCTCTT TCCGGGCCGC ATGGTCTCGG CGCGCCATGT GCGCGAGAAC CTCCTGCAGC TGGCCATGCC CGAGCCCGAG GGCCAGTCCG AACTGCCCCC GGCCGCGTTG CCCGCGGCGC AGGGCCTGCC GGAGCCGGGC CAGTTCGGGG GCATGCTGGA GGGGCGCACC GATCTCGACC TGCGGGGCTA TCTCCGCGAC ATCGAGGTGG CGCTGATCGA GGCCGCGCTG GCACAGCACG ACGGCTGCGT CAGCCGCGCG GCCGATGCGC TGCGCCTCCG CCGCACGACG CTCATCGAGA AGATGAAGAA GTTCGGCATC ATGCGCGGGG TCGAGGCCTG A
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Protein sequence | MTSHFSLDTI RSRPLPPPEG LVDRVIPGES VAIRRVKQLI GAVAISEAPV LVRGATGTGK ELVAEALHRA SGRGGNLVAV NCAAIPAELL ESELFGHEKG AFTGAERQRI GRIEMAHGGT LFLDEIGDMP LALQAKLLRV LESRRISRVG GTGEIDVDFR LVTATHRNLD AQVAKGGFRS DLYYRINVFP LELPDLRERT SDIPLILARM LDDHLARNPA ADLPHFDAGA LRALGAHDWP GNVRELRNVL ARALVLFPGR MVSARHVREN LLQLAMPEPE GQSELPPAAL PAAQGLPEPG QFGGMLEGRT DLDLRGYLRD IEVALIEAAL AQHDGCVSRA ADALRLRRTT LIEKMKKFGI MRGVEA
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