Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1544 |
Symbol | |
ID | 5084268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1582768 |
End bp | 1584066 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640483103 |
Product | TRAP dicarboxylate transporter, DctM subunit |
Protein accession | YP_001167743 |
Protein GI | 146277584 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACCCGA TTACCCTCGT CTTCGGCAGC CTCGTGGTGT TCCTGCTCTT CGGCGTGCCG GTGGCCTATG CGCTTGGAAT GTCCTCGCTT CTGGTCATCG TCTGGGCCGA CCTGCCGCTC TCGATCTTCG CGCAGCGCGC CTACCAGTCG CTCGACAGCT TCGTGATGCT GGCGGTGCCC TTCTTCCTGC TCGTGGGCCT GCTTATGAAC AGCGCCGGCA TCTCGGCGCG GATGCTGGAG CTGGCCGGGG CGATGTTCGG CCGGACGCGC GGGGCGCTGG CCAAGGTCAA TGTCGCCGTC AGCATGTTGT TTGCGGGCCT TTCCGGCTCG TCGGTGGCGG ATGTGGCGGG GATGGGGTCG GTCCTGATCC CGGCGATGAT CCGCGAGGGC TATCCCCGCG CCTTTGCCGT GGCCGTGACC GCGGCCTCGT CCACCATCGG CATCATCATC CCGCCGAGCA TCTTCATGGT GGTCTATGGC GCGGTGGGCG ATGTCTCGAT CGGCGCGCTC TTTCTGGCCG GCGCCCTTCC GGGGCTCCTG ATCGGTGTCA CGCAGATCAC CTTCTGCCAC CTGCTCGCGA TCCGCCAGAA CCATCCGGTC GGCCAGCCCT TCTCGCTCGC CCGGCTGGGC CGGGCGGCGC AGCGGGGCGT GCTGCCCTTC GGCGTCACGG TGGTCATCAT CGGAGGCATC ATCGGCGGCA TCTTCACCGC GACCGAGGCC GCTGCCGTCG CCGTCATCTA CACGCTGCTG CTGGGGATCT TCTACCGGAC GCTGAAGCTG CGCGGCCTGA TCGACTCGTT CCACGGGGCT GCGGTCCATC TGGGGCCCAC GCTGCTCTGC GTGGCCACCG GCAGCGTCTT TGCCTGGGTG CTGGCCTTCC TGCAGGTGCC GAACGAGGTC TCGCGGATGG TGGCCTACCT CGATCCCTCG CCCTCGATGG TGCTCATGTT CATCATGGTG CTCTTCGTCA TCGTCGGCAC CTTCGAGAGC GGCGTGGCCT CGATCATCAT CTTCCTGCCC ATCGTGCAGC CCATCGCCGC GGCGGCGGGG CTCGATCCGG TGCATGTCGG GGTGATCGTC TGCATGACCC TGGCGCTGGG GCTGATCACG CCGCCCTACG GGCTCTGCCT GTTCGTCGCG GCCAGGATCG GCGGCATCTC GGTCGAACGT TCGTTCGTGG CGGTGCTGCC CTGGATCGGC CTGTTCCTGG TCGTCGACGT GATCTGCGTG CTGCTGCCCG ATCTGGTGCT GTTCCTGCCG CGGCTTCTGG TGCCGCAGTT CATGGGGATG CCGCAGTAG
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Protein sequence | MDPITLVFGS LVVFLLFGVP VAYALGMSSL LVIVWADLPL SIFAQRAYQS LDSFVMLAVP FFLLVGLLMN SAGISARMLE LAGAMFGRTR GALAKVNVAV SMLFAGLSGS SVADVAGMGS VLIPAMIREG YPRAFAVAVT AASSTIGIII PPSIFMVVYG AVGDVSIGAL FLAGALPGLL IGVTQITFCH LLAIRQNHPV GQPFSLARLG RAAQRGVLPF GVTVVIIGGI IGGIFTATEA AAVAVIYTLL LGIFYRTLKL RGLIDSFHGA AVHLGPTLLC VATGSVFAWV LAFLQVPNEV SRMVAYLDPS PSMVLMFIMV LFVIVGTFES GVASIIIFLP IVQPIAAAAG LDPVHVGVIV CMTLALGLIT PPYGLCLFVA ARIGGISVER SFVAVLPWIG LFLVVDVICV LLPDLVLFLP RLLVPQFMGM PQ
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