Gene Rsph17025_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1411 
Symbol 
ID5083085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand+ 
Start bp1437165 
End bp1438172 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content67% 
IMG OID640482969 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001167613 
Protein GI146277454 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.473028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA TCGCGATCAA CGGCCTCGGC CGGATGGGCA AGCTTCTGCT GCGTGAACTG 
ATCGACCGTG GCATGGGCGG TGACATCGTG CTCTTGAACG ACGCCGAGGG TGATCCGGCG 
CAGCACGCGC TGCTGCTGGA GTTCGACAGC GTTCACGGCC GCTGGCCGAC GCCGGTGGCC 
CATGATGCCG AGAGCCTGAC GCTGGCTGGC CACCGTGTGC CCCTGAGGCG CGCCCGGCGG 
ATCGAGGACC TGCCGCTTGC CGATCTGGGC GTCGATCTGG TGGTCGATTG CACCGGGGTC 
TTCAAGACGG CGGCGAAGAT CGCGCCCTAT TTCGAGGCGG TGGGCAAGGT GGTGGTCTCG 
GCGCCGGTCA AGGACGGCGG CGCGCTGAAC CTCGTCTATG GCATCAACCA TCACCTCTAC 
GACGGCAGCC AGCGGCTGGT GACGGCGGCC TCCTGCACGA CGAACTGCCT CGCCCCGGTG 
GTGAAGGTGC TCCACGAGGC AATCGGCATC CGGCATGGCT CGATCACCAC GATCCATGAC 
GTGACGAACA CGCAAACCAT CGTGGACCGC CCCGCCAAGG ACATGCGCCG GGCGCGCTCG 
GCGCTGATGA ACCTGATCCC GACCACGACC GGCTCGGCCA CCGCGATCGG GCTGATTTAC 
CCGGAACTGA AGGGGCGGCT GAACGGCCAT GCGGTGCGGG TGCCGCTTCT GAACGCCTCG 
CTGACCGATT GCGTCTTCGA GGTCGCGCGG CCCACGACGG CGGAAGAGGT CAACGGGCTT 
CTCGCCAGGG CCGCAGCGGG TCCGCTGCGG GGGATCCTGG GATATGAGGA ACGGCCACTG 
GTCTCGTCGG ATTTCCTGAA CGATCCGCGC TCGGCGGTGG TGGATGCGGC CTCGACGATG 
GTCATCGGAG GGACGCAGGT GAAGCTCTAC GCCTGGTATG ACAACGAATG GGGCTATGTC 
TGCCGGCTGG CCGACATCAC CCGGATGGTG GCGGAGAGTC TGGCATGA
 
Protein sequence
MARIAINGLG RMGKLLLREL IDRGMGGDIV LLNDAEGDPA QHALLLEFDS VHGRWPTPVA 
HDAESLTLAG HRVPLRRARR IEDLPLADLG VDLVVDCTGV FKTAAKIAPY FEAVGKVVVS 
APVKDGGALN LVYGINHHLY DGSQRLVTAA SCTTNCLAPV VKVLHEAIGI RHGSITTIHD 
VTNTQTIVDR PAKDMRRARS ALMNLIPTTT GSATAIGLIY PELKGRLNGH AVRVPLLNAS 
LTDCVFEVAR PTTAEEVNGL LARAAAGPLR GILGYEERPL VSSDFLNDPR SAVVDAASTM 
VIGGTQVKLY AWYDNEWGYV CRLADITRMV AESLA