Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1321 |
Symbol | |
ID | 5083280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1351110 |
End bp | 1352210 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640482880 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_001167527 |
Protein GI | 146277368 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAGA CCTACAACCA CCTCTGGCCC CAAATCATCG CATTCGAGAC GCTGGTCGAG GCCTGGGCGC GCACGTCGAA GGGTCGCCAC CGGCAGCGCG ACGTGATCGC CTTCGAGGCC GACCTCGAGC CGAACCTCTT CGCGATCCAG GAGAGCCTGA TCCAGAAGAC CTATCGCACC GGCCCCTACC ATCGCTTCTT CGTCTACGAG CCGAAGAAGC GCGAGATCGC CTCGCTCCCG CTGAAGGACC GCGTGGTGCA GCACGCCCTG GTGAGCGTGA TCGAGCCGAT CTTCGAGGCC CGCTTCATCG ACCAGAGCTT CGCCTGCCGC GTCGGCAAGG GCGCTCACAA GGGCGCGGAC ACGGTTCAGC GATACATGCG CGAGGTGCTC CGCGAGCAGG GGCAGGTCTT CGCGCTCAAG GCCGACATCT CGAAATACTT CCCGTCCGTC TGCCACGACG CCCTGCGGCG CATCATCCGC CGGCGGATCG CCTGCCCGGA CACGCTCTGG CTCATCGACA GCATCCTCGA GAGCTCGGCC GAGCCGGGCG CCCTGACCCC GCGCGGCATC CCGATCGGCA ATCTCACGAG CCAGATGTTC GCCAACATCT ACCTGCACGA GCTCGACCAC TTCGTGAAGC ACACCCTGCG CGAGCGCCGC TACGTCCGTT ACATGGACGA CTTCGCCGTG ATCCATCACG ACAAGGCGCA CCTGCACGAG GTCCGCCGGG CCTGCGAGGA CTTCCTGTGG GCCGAGCTGG GCCTGCGGAC GAACGCCAAG ACGCAGGTCT TCCCGATAGG CGAGCCCGGC CGCGCGCTCG ACTTCCTGGG CTACCGGATC TGGCCGACGC ACCGCGCCCT GCGGAAGGAC AGCGTGAACC GCATGAAGCG GAAGATGCGC CGGATGGCCT CGCTCTATCA CCGCGGCGAG ATTACCTGGG ACGACATCGA CCCGGTCATC ATGTCCTGGA TCGGCCATGC CCGCCACGCG GACACCTACA ATCTGCGGAC CAAGGTGCTG GGAGGGGTAG CCTTCGTGCC GCCGCCTCTG CATGTGGCCG CCGAGCGCCG GGCCAACAGC GGGCATTTAA GGCCGGTTTA A
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Protein sequence | MAKTYNHLWP QIIAFETLVE AWARTSKGRH RQRDVIAFEA DLEPNLFAIQ ESLIQKTYRT GPYHRFFVYE PKKREIASLP LKDRVVQHAL VSVIEPIFEA RFIDQSFACR VGKGAHKGAD TVQRYMREVL REQGQVFALK ADISKYFPSV CHDALRRIIR RRIACPDTLW LIDSILESSA EPGALTPRGI PIGNLTSQMF ANIYLHELDH FVKHTLRERR YVRYMDDFAV IHHDKAHLHE VRRACEDFLW AELGLRTNAK TQVFPIGEPG RALDFLGYRI WPTHRALRKD SVNRMKRKMR RMASLYHRGE ITWDDIDPVI MSWIGHARHA DTYNLRTKVL GGVAFVPPPL HVAAERRANS GHLRPV
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