| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1267 |
|---|
| Symbol | |
|---|
| ID | 5084661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 1306661 |
|---|
| End bp | 1308745 |
|---|
| Gene Length | 2085 bp |
|---|
| Protein Length | 694 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640482826 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001167473 |
|---|
| Protein GI | 146277314 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.870366 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCGA GCAGGCTGGT CTTGCTGGCC GGCAGCGGGC CGTCGTGGAA GCCGTCGGGG
ACCTACTCGA TCTCCGGGCC TGTGGAGAAC AAGTCCCCCC TCGGCGGCCA GGCGACATTC
CCCACCGACC CTTACATGGG CCGCGTTGTC GGGATTCCCG GCAGCATCAC GGGCAACTTC
CATATCGCGC CCATGGGCTA CCTGCCGAAC GTGACGGGCA AGACCTACCG AGCCACGATC
AAGGCCCGGC ACAACTCCGC CTTCGTTGGG GACAGTGCGA ACGCCCTGAT TTATTTGGTT
CGCAAATATG ACAAGGACTT CGCCTCCGTC ACTGACATCA GGGCTGCGGC CCTGACGTTC
CCTGCGCCGA ACAGCATCCG AACCTTCCAG GTCGAATGGA CCAGTGACGG AAGCAGCGGG
GCCCCTTACA TTCTGCCCTT CGCCTACGTC TCGGGGTCCC GGACCTCCGC GTCCATGAGT
ATCGACATCC AGTCGATCGA GGTGGTGGAC ATCACCGGGG CCGCTGAGGT GGCCGCCAAC
CTGTCGAACA ACTACCTCAC ATCGGCACAG ACGAACGCGG CCATCGCCGC GGTCCAGACC
AGCCTTTCGG GTCAGATCAA CAGTGGCGAC ACGGCTCTCC AGTCGAACAT CAACAGCATC
CTCGGTCTCA CGATCAGCCC GTCGAGCGCG CTGGCGACCA CGTTGACGAA CCTGCAGAGC
ACGGTGGGGT CGCAGTCGGC GTCCATCTCG GCCCAGGGCG CCGCCCTTGC GACGCTGCAG
GGCAATGCCA GCGCCTCCTA TGTGCTTCGC GCCAAGGCCG GCGGCGCCAG CGCACTCCTC
GAGATCGTCG CGGCGGACAA TCCGAACGGG CCCGTCTCCG TGTTCCGGGT GGCCGCCACC
GACATCCTGC TCGACGGTTC GGTGGCGGCG CGGCAACTCG TCGTCACCGA CTTCAGCGGC
AACCTCGTGA ACAACGGCGC GATCCCCTAC GGCGACACGC GCGGATGGGG GCCGCTCCCG
GCGTCCTTCG CCGTCGTGGC TCGGGACCCG GCCAGCACGG CCACGGTCCT GCAGACCGCG
CCCACGGGCT ACATACTGAG GCTGGCCACC GACGCGGCTC CCCAGGTGGT CGAGATCGGT
CGCTTCGACT GTTCGGCCGG GGAGCGGTTC GTGGCCAGCT ACTCCTGCGC CGGGAACAGC
GGGGCCAACG CGCAGATCGG CATCCAGTAT GTCTGGTTCG ACGCGGATGG GGCGGTCGTC
GCCAACACCG GACGATATAC GACCGTCACG ACGGGCGTCT GGCAGAGCGT CACCACCCCC
GCCGCCACCG CCCCGGCCGG AGCCGCCAAA TGCGTCCTGC GCGCGGTACG GATCGGGGGA
GGATCCGGCT TCGGGTTCTT CACCAACATG GAGGTGGTGA AGCAAAGGTC GGGGCAGACC
CTGGTCACGC CGAACAGCCT GACGACAGAG CTTGTCAACA CCGAAGACTT CTCCGCGAAG
GGCCTTGCCG TCTTCGGCGG TGCACTGCAG TCGGACAACT TCAACGCCGC GACGGGCACC
GGATGGCAGC TCACCAAGGC CGGGGGTCTG AAGATCCCAT ACCTGTCGGT CAGTACCCCC
ATCCTTGCCC CCAACGCCAT CAGCAGGATG GTCTCGGTCG CATCCAGCGA GGTAGTGGCG
CCAGGCACAG GACTTGGGAA ATGGAACCGG CAATATCCCC CCAACGCCAT CCCATCCGGG
AGGCCCGGCC CTGTTGACGA GACCCGCAGC GGATACGCGG ATTATCTCAC GGCAACCATA
TCGGCACCCT ACACCTATGA CCTCTACTTC TGGATCTCTG CTACGGCCGG GGACGTGGTA
GCGGCCATAT TCCGTAACGC CCAGACCTCT CAATACAACG GGTGGGCGCA CCGGACCGTC
TTGGATTCCC ACACCGGCGA TAGCTACAAC TCCGGTGCCA TCATGGGCGT GATCCCTGGC
GTCTCCGGCA CCCAATCACT CACCTTGGCC TTTGCAGGCA TCAGCGGCTC CTCGTGGACA
TCGGTTGCCA ACGCAACAAT CACCCTCATG GCGGTCATGA AATGA
|
|---|
| Protein sequence | MTSSRLVLLA GSGPSWKPSG TYSISGPVEN KSPLGGQATF PTDPYMGRVV GIPGSITGNF
HIAPMGYLPN VTGKTYRATI KARHNSAFVG DSANALIYLV RKYDKDFASV TDIRAAALTF
PAPNSIRTFQ VEWTSDGSSG APYILPFAYV SGSRTSASMS IDIQSIEVVD ITGAAEVAAN
LSNNYLTSAQ TNAAIAAVQT SLSGQINSGD TALQSNINSI LGLTISPSSA LATTLTNLQS
TVGSQSASIS AQGAALATLQ GNASASYVLR AKAGGASALL EIVAADNPNG PVSVFRVAAT
DILLDGSVAA RQLVVTDFSG NLVNNGAIPY GDTRGWGPLP ASFAVVARDP ASTATVLQTA
PTGYILRLAT DAAPQVVEIG RFDCSAGERF VASYSCAGNS GANAQIGIQY VWFDADGAVV
ANTGRYTTVT TGVWQSVTTP AATAPAGAAK CVLRAVRIGG GSGFGFFTNM EVVKQRSGQT
LVTPNSLTTE LVNTEDFSAK GLAVFGGALQ SDNFNAATGT GWQLTKAGGL KIPYLSVSTP
ILAPNAISRM VSVASSEVVA PGTGLGKWNR QYPPNAIPSG RPGPVDETRS GYADYLTATI
SAPYTYDLYF WISATAGDVV AAIFRNAQTS QYNGWAHRTV LDSHTGDSYN SGAIMGVIPG
VSGTQSLTLA FAGISGSSWT SVANATITLM AVMK
|
|---|
| |