Gene Rsph17025_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1226 
Symbol 
ID5084399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1270174 
End bp1270848 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID640482784 
Productpeptide methionine sulfoxide reductase 
Protein accessionYP_001167432 
Protein GI146277273 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.377072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTGC TCAATCGTAA GAAGTCCGAG ATGGTCTCTC CCGCCGAGGC GCTGCCCGGC 
CGACCCGACC CGATCCCCAC CGCCGAGACG CATTTCCTGT CCGGCCTGCC GCTCAAGTCG
CCGGTGCCTG CGGGCATGGC CGAGGCGGTC TTCGGCATGG GCTGTTTCTG GGGCGTCGAG
CGCAAGTTCT GGCAGGTGCC CGAGGGGGTC TGGCTCACGA TGGTGGGCTA TGCCGGCGGC
TACACGCCGA ACCCGACCTA CGAGGAGGTC TGCTCGGGCC GCACCGGCCA TACCGAGGTC
GTGCGCGTGA TCTACGATCC CACGGTCGTC TCCTACGAGA TGCTCCTCAA GCTCTTCTGG
GAAAACCACG ATCCGACGCA GGGCATGCGG CAGGGCAACG ACACGGGCAC GCAGTATCGC
TCGGCGATCT ACACCTATGG CGAGGCGCAG GCCGAGGCGG CGCGTGCGAG CCTTGCGGCC
TATCAGGGGG CGCTGACCGC GGCCGGCCGC GGCCGGATCA CCACCGAGAT CCACCCGGCG
CCCGCTTTCC ATTTCGCCGA AGCCTACCAT CAGCAATATC TGGCCAAGAA CCCGGCCGGC
TATTGCGGCG TTGGCGGCAC CGGGGTCTCC TGCCCGATCG GGACCGGGGT CGGGGCGGCG
GCGCCCGCAC GCTGA
 
Protein sequence
MFLLNRKKSE MVSPAEALPG RPDPIPTAET HFLSGLPLKS PVPAGMAEAV FGMGCFWGVE 
RKFWQVPEGV WLTMVGYAGG YTPNPTYEEV CSGRTGHTEV VRVIYDPTVV SYEMLLKLFW
ENHDPTQGMR QGNDTGTQYR SAIYTYGEAQ AEAARASLAA YQGALTAAGR GRITTEIHPA
PAFHFAEAYH QQYLAKNPAG YCGVGGTGVS CPIGTGVGAA APAR