Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1211 |
Symbol | |
ID | 5084495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1252358 |
End bp | 1254691 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640482769 |
Product | quinoprotein glucose dehydrogenase |
Protein accession | YP_001167417 |
Protein GI | 146277258 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.471268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.152671 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCGTCA CGATCACCGC CATCGTCCTC GCCCTGGCGG GCCTGGGCCT CCTGATCCCG GGGGTGTGGC TCGCCACCCT CGGCGGAAGC TGGTTCTACG CCGCGGCCGG TGCCGTCATG CTGCTGTCGG CCTGGCAGGT GCATCGGCGC TCGGCCGCCG CCGAATGGAC CTATGGCGCG CTCATCCTCG GCGCGCTTCT CTGGTCGATC TGGGAGGTCG GATTCGACTG GTGGCAACTG GTCCCCCGCG GGGGCGTGAT CGCGGTTCTG GGCATCTGGC TCTACCTGCC CTTCATGCGC CGCCAGCTTC TGACCGAGGA CCACCACCCC GCGCCCGGCC TGCCGCTCGC GCTGCCGCTG CTGGCGGCGA TCGGGGTGGC GATCTGGTCC TGGACCGGCG ACGAGGCCAG TCGCAAGGGC GAACTTCCCA CCGAGGTGGT CAGCGCCGAG CCCGATCTCG GGCCGACGGC GCCACCGGGC GAGTGGCACC AGTATGGCCG CACGCAATAT GGCCAACGGT ATTCGCCGCT CGATCAGATC AACATCCAGA ATGTCGCCGA ACTCGAGCAG GTCTGGCACT ATCAGACCGG CGACGTGAAG CTGCCCGAGG ACGTGACCGA AACAACCTAT CAGGTCACGC CGCTCAAGGT GAACAACCGG CTCTACATCT GCACGCCGCA CAATCTGGCC ATCGCGCTCG ATGCGGCCAC CGGCAAGCAG GCGTGGCGCT TCGACGCCAA CTCCGGGCTC GAGCCCGACC GCCAGCACCA GACCTGCCGG GGCGTCACTT ACTGGCGCGA TCCGGGCCGG GAAGAGGGCG AGCTGTGCGC GGCGCGCGTC TACATGCCGA CGGCCGATGC GCGCCTCATA GCGCTCGACG CCAACTCGGG CGCGCTGTGC GACTTCTTCG CCGACAACGG GACGCTCCAC CTCGAGCACG GGATGCCCTA CACGCCGGCG GGCTTCTACT ACTCGACCTC GCCGCCTGTC GCGGTGGGCG GGCGCATCAT CATCGGCGGC GCGGTCAACG ACAATTTCTC GATCTATTCC CAGTCGGGCG TGATCCGGGC CTTCGACGCC AACACGGGCG CGCTCCTGTG GAACTGGGAC AGCGGCAATC CCGACAGCAC CGCGCCCATC GACTGGATGA ACGGCGAGAC CTACACCCCG AACTCGCCGA ACTCCTGGTC CGTGTTCTCG GTCGATGAAG AGCGCGGTCT CGTCTATATC CCGCTCGGAA ACCAGGTGCC GGACCAGCTC GGGATGGGGC GGTCGGAGGC GGTCGAGGAA CATGCGTCCT CCGTCGTGGC GCTGGACGTG GCGACGGGGC AGAAGGCGTG GGTGTTCCAG ACCGTCCATC ATGACCTCTG GGACATGGAT GTGCCGGCGC AGCCCGTGTT GATCGACCTG GAGATCGAGG GCGAGACGGT GCCCGCGCTT GTCCAGCCGA CCAAGCAGGG CGACATCTAT GTGCTCAACC GCGAGACGGG CGAGCCGGTG CTGCCGGTGT CGGAAGAGCC CGCCCCGCAG GAGGGGGGCC TCGACGAGGA GACTCTCGCC CCCACGCAGC CCGTCTCGTC CCTCAGCTTC GCACCCGATC CGCTGCGCGA ACGGGACATG TGGGGCATCA CGATCTATGA CCAGCTCGCC TGCCGGATCC AGTATCACCG GCTGAACTAT CAGGGCCGCT ACACGCCTCC GTCGCTGAAC GGCACGATCG TCTATCCCGG CAATTTCGGA ACCTTCAACT GGGGCTCGGT CGCGGTCGAT CCCGAGCGGC AGGTCATGTT CGGGATGCCG ACCTACCTGC CCTTCACCGT CGAACTCGTC CCCGAGGAGG AGATCCCGCC GCCGGGCGCA AACGAGACCG CCAGCGAGCA GGGTCTCAAC CGCAACGAGG GCGCGCCCTA CGGCGTCATC ATGGGCCCGT TCCTCGGGCC GCTGCAGGTG CCCTGCTCGG CGCCGCCGTG GGGCTTCGTC GCGGGGACGG ACCTGCGCAC CGGCGAGATC GCCTACAAGC GCCGCAACGG CACGGTGCGG GACATGACGC CGCTGCCGCT GCCCTTCAAG GTGGGCGTGC CGGGGATCGG CGGGCCGATC ATCACCCGGG GCGGCGTGGT CTTCCTCGGC GCGACGGTGG ATGACTATCT GAGGGCCTAT GACCTGACCA CCGGCGATGA ACTCTGGCGC GCGCGCCTTC CGGCCGGGGG GCAATCCACG CCCATGACCT ACGAGCAGGA CGGGCGGCAG TATCTCGTCA TTGTGGCCGG CGGTCATGGC TCGGTGGGCA CGAAGCCGGG GGACCATGTG ATCGCCTACG CCCTTCCCGA CTGA
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Protein sequence | MTVTITAIVL ALAGLGLLIP GVWLATLGGS WFYAAAGAVM LLSAWQVHRR SAAAEWTYGA LILGALLWSI WEVGFDWWQL VPRGGVIAVL GIWLYLPFMR RQLLTEDHHP APGLPLALPL LAAIGVAIWS WTGDEASRKG ELPTEVVSAE PDLGPTAPPG EWHQYGRTQY GQRYSPLDQI NIQNVAELEQ VWHYQTGDVK LPEDVTETTY QVTPLKVNNR LYICTPHNLA IALDAATGKQ AWRFDANSGL EPDRQHQTCR GVTYWRDPGR EEGELCAARV YMPTADARLI ALDANSGALC DFFADNGTLH LEHGMPYTPA GFYYSTSPPV AVGGRIIIGG AVNDNFSIYS QSGVIRAFDA NTGALLWNWD SGNPDSTAPI DWMNGETYTP NSPNSWSVFS VDEERGLVYI PLGNQVPDQL GMGRSEAVEE HASSVVALDV ATGQKAWVFQ TVHHDLWDMD VPAQPVLIDL EIEGETVPAL VQPTKQGDIY VLNRETGEPV LPVSEEPAPQ EGGLDEETLA PTQPVSSLSF APDPLRERDM WGITIYDQLA CRIQYHRLNY QGRYTPPSLN GTIVYPGNFG TFNWGSVAVD PERQVMFGMP TYLPFTVELV PEEEIPPPGA NETASEQGLN RNEGAPYGVI MGPFLGPLQV PCSAPPWGFV AGTDLRTGEI AYKRRNGTVR DMTPLPLPFK VGVPGIGGPI ITRGGVVFLG ATVDDYLRAY DLTTGDELWR ARLPAGGQST PMTYEQDGRQ YLVIVAGGHG SVGTKPGDHV IAYALPD
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