Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1165 |
Symbol | |
ID | 5084338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1206013 |
End bp | 1207347 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640482723 |
Product | tRNA (uracil-5-)-methyltransferase Gid |
Protein accession | YP_001167371 |
Protein GI | 146277212 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0510605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.555417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGCA GCCTGCACAT CGTGGGGGCC GGCATGGCCG GCTCCGAGGC CGCATGGCAG GCCGCAGAGA TGGGCGTGCC TGTCGTGCTG CACGAGATGC GGCCACGGGT CGGCACCTTC GCCCACCGCA CCGGCCAGTT CGCCGAGATG GTCTGCTCGA ACTCGTTCCG CTCGGACGAT GACGAGAGAA ACGCCGTGGG GCTTCTCCAC TGGGAGATGC GCGCGGCCCG CGGGCTCATC ATGGAGATGG CCTCGGCCCA CCGGCTTCCC GCTGGCGGCG CGCTGGCGGT GGACCGCGAT CCGTTCGCGG AAAGCGTGAC GGCGCGGCTG CGAGAGCATC CGCTGATTTC CGTTGTGGAC GAAGAGCTTG CGGAACTTCC CTCAGATGGT GACTGGATCA TCGCGACCGG GCCGCTGACC TCATCGAGCC TTGCCGAGAG CATCCGCGCC GTCACAGGCG CGCAGTCGCT GGCCTTCTTC GACGCCATCG CGCCCATCGT CTATGCCGAG AGCATCGACA TGTCGGTTGC CTGGCGGCAA TCCCGCTACG ACAAGGGCGA GACCGAGGAC GAGCGCACCG CCTACATCAA CTGCCCCATG ACCCGCGATC AGTATGAAGC CTTCATCGAT GCCCTTCTGG CCGCGGAGAA GACCGAGTTC CACGAGGGTG AAACGGCCGG CTATTTCGAC GGTTGCCTTC CCATCGAGGT CATGGCCGAG CGCGGGCGCG AGACGCTGCG CCACGGGCCG ATGAAGCCCG TCGGGCTGAC CAACGCCCAC AAGCCGCAGG ACAAGGCCCA TGCTGTTGTC CAGCTCCGGC GCGACAACAA GCTCGGCACG CTCTACAACA TCGTGGGCTT CCAGACCAAG ATGAAGTATG GCGCGCAAAC GTCTGTTTTC CGTATGATTC CTGGCCTGGA GAATGCGAGC TTTGCACGTC TCGGCGGCAT TCACCGCAAC ACCTTCCTGA ACTCGCCAAC GCTGCTCGAT GACCGGATGC GGCTGAAGTT GAGACCGAAC ATTCGCTTCG CCGGGCAAGT AACCGGCGTG GAAGGATATG TCGAGAGTGC GGCCATGGGC CTTCTGGCGG GGCGGATGGC TGCGGCCGAG ATCCTCGGCC GCGATCTGCC GCCGCCGCCG CCCGAGACGG CGATGGGCGC GCTGATCACC CACATCACCG GCGGCGCCGA AGCGAAGACC TTCCAGCCCA TGAACGTGAA CTTCGGGCTC TTTCCTCCGA TCGACGCCCG GGGCGGCCGC CGCGGCCGCA AGGACCGCTA CAAGGCCTAT ACCCACCGCG CCAAGGCGGC TTTCACCGAA TGGCTGGCCG CGTAA
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Protein sequence | MTRSLHIVGA GMAGSEAAWQ AAEMGVPVVL HEMRPRVGTF AHRTGQFAEM VCSNSFRSDD DERNAVGLLH WEMRAARGLI MEMASAHRLP AGGALAVDRD PFAESVTARL REHPLISVVD EELAELPSDG DWIIATGPLT SSSLAESIRA VTGAQSLAFF DAIAPIVYAE SIDMSVAWRQ SRYDKGETED ERTAYINCPM TRDQYEAFID ALLAAEKTEF HEGETAGYFD GCLPIEVMAE RGRETLRHGP MKPVGLTNAH KPQDKAHAVV QLRRDNKLGT LYNIVGFQTK MKYGAQTSVF RMIPGLENAS FARLGGIHRN TFLNSPTLLD DRMRLKLRPN IRFAGQVTGV EGYVESAAMG LLAGRMAAAE ILGRDLPPPP PETAMGALIT HITGGAEAKT FQPMNVNFGL FPPIDARGGR RGRKDRYKAY THRAKAAFTE WLAA
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