Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1149 |
Symbol | |
ID | 5084581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1184126 |
End bp | 1185247 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640482707 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001167355 |
Protein GI | 146277196 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.499409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAACA TCGCCGGCAC CCGGTCGAGC CTCGTCTGGG CGGTGCATCT CGCGGTCGTG GCGCTGGTGC TGCTCTGGAC CGTTCCGACG GTGGGCCTGC TCGTCTCGTC CTTTCGCGAC CGCGACCAGA TCGCGACCTC GGGCTGGTGG GCCGCGCTCT TTCCGGCCGA GGAGCGGCAG GTCGTCCGCC TTGCGGGCGC GGGCGACCAG CGGCAGGAGG GGGATCTCTG GGTGATCGAG GGCACGCTGA TCGACGAGGG CACGCTGAAC CGCTTCGGCA CCTCGGCGCG CGAGCCCTTC GCCCACGCCG CGGGCGAGAC GGGCACGCTC GCCAACGGCG GCCGCGTCAC GGTCGAGGCG GACGGACGCT ACCGGGCCGA GGCGCCCGAG CCCTTTGCCG AGCGCGGGCC GCGCCTCTTC GTGGCGGTCG AGACGCCGCC GCGCTTCACG ACGGACAATT ACGACCGCGT GCTCTTTGCC GAGGGGATCG GCCGGGCCTT CCTGAACACG ATGACGGTCA CGATCCCCGC CACGGTCATC CCGATCCTCG TGGCGGCCTT CGCGGCCTAT GCGCTGGCCT GGATGGAATT TCCGGGGCGG GCGCTGCTGA TCGCGGCGGT GGTGGGGCTT CTGGTGGTGC CGCTGCAACT GGCGCTGATC CCGCTTCTGC AACTTCACAA TGCGGTGGGG ATCGGCAAGG ATTACCTCGG CATCTGGCTC GCCCATTCGG CCTTCGGCCT GCCGCTCGCG ATCTATCTCC TGCGCAACTA CATGGTGGGC CTGCCGCGCG AGATCATCGA GAGCGCGCGC GTCGATGGGG CGACCGACTT CCAGATCTTC GTCCGCATCA TCCTGCCGCT GTCGTTTCCC GCGCTCGCGA GCTTTGCGAT CTTCCAGTTC CTCTGGACGT GGAACGACCT CCTCGTGGCG ACGGTCTTCC TGTCCAACAC GCCCGAGCAA CTGGTGATGA CCGGCGTGCT GCGCGAGCTT CTGGGCTCGC GCGGCGGCGA CTGGGAGATC CTCGCGGCCT CGGCCTTTGT CTCTATTGCG GTGCCGATCG TCGTGTTCTT CGCGATGCAG CGTTATCTCG TGCGCGGGCT GCTGGCGGGG TCGGTGAAAT GA
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Protein sequence | MDNIAGTRSS LVWAVHLAVV ALVLLWTVPT VGLLVSSFRD RDQIATSGWW AALFPAEERQ VVRLAGAGDQ RQEGDLWVIE GTLIDEGTLN RFGTSAREPF AHAAGETGTL ANGGRVTVEA DGRYRAEAPE PFAERGPRLF VAVETPPRFT TDNYDRVLFA EGIGRAFLNT MTVTIPATVI PILVAAFAAY ALAWMEFPGR ALLIAAVVGL LVVPLQLALI PLLQLHNAVG IGKDYLGIWL AHSAFGLPLA IYLLRNYMVG LPREIIESAR VDGATDFQIF VRIILPLSFP ALASFAIFQF LWTWNDLLVA TVFLSNTPEQ LVMTGVLREL LGSRGGDWEI LAASAFVSIA VPIVVFFAMQ RYLVRGLLAG SVK
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