Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1102 |
Symbol | |
ID | 5084705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 1127480 |
End bp | 1128151 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640482660 |
Product | hypothetical protein |
Protein accession | YP_001167308 |
Protein GI | 146277149 |
COG category | [S] Function unknown |
COG ID | [COG5388] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.923866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0200778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATGA GGTTCGGCGG CACCGGCATC GGTCACCCGG GCGGAGGGGG ACGCGCGGGC GTCGATCCCG CCGCGCTGCT GGTCGTTCGG AGCCACTGGC ACGAGTTGCG CCGCCGCGCG GGCGGCGAGC TGCCCGGCCG CGCCGACATC GACCCCCGGC GCATCGAGGG CGCATTGGGG TGCGCCTTCC TCGCCGAGCG CATCGCGCCG GGCATGGCGC GCTTCCGCCT TGCCGGCATG CATCTGGCCG ATCTTCTGGG CATCGACGTG CGGGGCATCC CGATCTCGAC CATGTTCGGC TTCGATTCGC GTGACCGTCT CGCCGAGGTT CTGGGCCGGG TCTTCACCGG CCCCGGCGTT GGCGAGGTCT GGATCGAATC GCCCGCCTCG CTCGGGCGGC AGGCTCTCAC GGGGCGGCTG CTGCTGTTGC CCCTGCGCTC GGAGGGCGAG CCGCCGCTGG TCTTCGGCTG CCTCGTGACC GAAGGGGAAA TCGGCCGGGC GCCGCGCAAG CTGACGATCA CGCGCTCGGC CGTGGAGATG ATCGAGGCGA TGCCGCCCGA GCGGCCCCTG CCGCGCCTTC GCCTGCCCGA GTTCTCCGAG GCCGGGTTCG AGGCCGCTCC GCCGCCGCCC CGCGCCAAGC CGGGCCGCGC GCACCTGCGG CTGGTCAAGT AG
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Protein sequence | MGMRFGGTGI GHPGGGGRAG VDPAALLVVR SHWHELRRRA GGELPGRADI DPRRIEGALG CAFLAERIAP GMARFRLAGM HLADLLGIDV RGIPISTMFG FDSRDRLAEV LGRVFTGPGV GEVWIESPAS LGRQALTGRL LLLPLRSEGE PPLVFGCLVT EGEIGRAPRK LTITRSAVEM IEAMPPERPL PRLRLPEFSE AGFEAAPPPP RAKPGRAHLR LVK
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