Gene Rsph17025_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1102 
Symbol 
ID5084705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand- 
Start bp1127480 
End bp1128151 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content74% 
IMG OID640482660 
Producthypothetical protein 
Protein accessionYP_001167308 
Protein GI146277149 
COG category[S] Function unknown 
COG ID[COG5388] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.923866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0200778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATGA GGTTCGGCGG CACCGGCATC GGTCACCCGG GCGGAGGGGG ACGCGCGGGC 
GTCGATCCCG CCGCGCTGCT GGTCGTTCGG AGCCACTGGC ACGAGTTGCG CCGCCGCGCG 
GGCGGCGAGC TGCCCGGCCG CGCCGACATC GACCCCCGGC GCATCGAGGG CGCATTGGGG 
TGCGCCTTCC TCGCCGAGCG CATCGCGCCG GGCATGGCGC GCTTCCGCCT TGCCGGCATG 
CATCTGGCCG ATCTTCTGGG CATCGACGTG CGGGGCATCC CGATCTCGAC CATGTTCGGC 
TTCGATTCGC GTGACCGTCT CGCCGAGGTT CTGGGCCGGG TCTTCACCGG CCCCGGCGTT 
GGCGAGGTCT GGATCGAATC GCCCGCCTCG CTCGGGCGGC AGGCTCTCAC GGGGCGGCTG 
CTGCTGTTGC CCCTGCGCTC GGAGGGCGAG CCGCCGCTGG TCTTCGGCTG CCTCGTGACC 
GAAGGGGAAA TCGGCCGGGC GCCGCGCAAG CTGACGATCA CGCGCTCGGC CGTGGAGATG 
ATCGAGGCGA TGCCGCCCGA GCGGCCCCTG CCGCGCCTTC GCCTGCCCGA GTTCTCCGAG 
GCCGGGTTCG AGGCCGCTCC GCCGCCGCCC CGCGCCAAGC CGGGCCGCGC GCACCTGCGG 
CTGGTCAAGT AG
 
Protein sequence
MGMRFGGTGI GHPGGGGRAG VDPAALLVVR SHWHELRRRA GGELPGRADI DPRRIEGALG 
CAFLAERIAP GMARFRLAGM HLADLLGIDV RGIPISTMFG FDSRDRLAEV LGRVFTGPGV 
GEVWIESPAS LGRQALTGRL LLLPLRSEGE PPLVFGCLVT EGEIGRAPRK LTITRSAVEM 
IEAMPPERPL PRLRLPEFSE AGFEAAPPPP RAKPGRAHLR LVK