Gene Rsph17025_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1038 
Symbol 
ID5084655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1064362 
End bp1065570 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content67% 
IMG OID640482595 
Productbeta-ketoacyl synthase 
Protein accessionYP_001167244 
Protein GI146277085 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAG TGGTCATTAC GGGCGCCGGC ACGATCAACG CGCTGGCGCA CGATGTTGCA 
GGCACGATCG CGGCCTTCCG AGAGGGCCGG TGCGGGATCA CCGATCTCGA CATCCGCGAC
AAGGAGCGGC TGTCGATCCA GATCGGTGGG CAGGTCCACA ACTGGGATCC CGAGGCGCAT
TTCAACCGCC AGCAGATCGT CCTCTACGAC AAGTTCACCC AGTTCACGCT TCTGGCGGCC
CGCGAGGCGG TGGCGCAGTC GGGGCTGACC TTTGCCGGCA GTCTGGGGCT GGAGGCCGGG
GTGATCCTCG GCACCGCGGG CGGCGGGGTG AACACCTGGG ACGAAAATTA CCGCGTGGTC
TATGAAGAGG GGAAGAACCG CGTCCATCCG TTCGTCGTGC CCAAACTGAT GAACAACGCG
GCCGCCTCGC ATGTCTCGAT GGAGTTCCAG CTCCGCGGGC CGTCCTTCAC GGTGGCGACC
GCCTGCGCCA GTTCGAACCA TGCGATGGGG CAGGCCTTCA ACATGGTCCG TTCGGGCATG
AGCCGGGTCA TGCTGACCGG CGGATCCGAG GCCATGCTCT GCTTCGGCGG GATCAAGGCG
TGGGAGGGGC TGCGCGTCAT GTCGAAGGAC GCCTGCCGGC CCTTCTCGCT GAACCGCAAT
GGCATGGTGC AGGGCGAGGG CGCGGCGATC TTCGTCTTCG AAGAATACGA GCACGCCCGT
GCGCGCGGCG CCGATATCCT GGCCGAGGTG ATCGGCTTTG CCATGACCTC GGACGCGTCC
GACATCGTGA TGCCCTCGAA GCTGGGGGCG GCGCGCGCCA TCGAGGGGGC GCTGCGCGAT
GCGAAGCTCA ATCCCGAGGC GGTGGGCTAC ATCAACGCCC ACGGCACCGG CACGGCGGCC
AACGACAAGA CCGAATGCGC GGCGGTGGCG GATGTGTTCG GCCATCACGC CGACCGGCTG
ATGATCTCGT CCACCAAGTC GATGCACGGC CACCTGATCG GCGGGACGGG CGCGGTGGAG
CTGCTGGCCT GCATCCTCGC CCTGCGCGAA GGGGTGATTG CGCCGACGAT CGGCTATGAG
GAGCCCGACC CGGAATGTGC GCTGGATGTC GTGCCGAACG TGGCGCGCGA GGCGCGGGTG
GATGTGGTGC TCTCGAACGC CTTTGCCTTT GGCGGGCTGA ACGCGGTCCT CGCGCTGCGC
CGCGTCTGA
 
Protein sequence
MKRVVITGAG TINALAHDVA GTIAAFREGR CGITDLDIRD KERLSIQIGG QVHNWDPEAH 
FNRQQIVLYD KFTQFTLLAA REAVAQSGLT FAGSLGLEAG VILGTAGGGV NTWDENYRVV
YEEGKNRVHP FVVPKLMNNA AASHVSMEFQ LRGPSFTVAT ACASSNHAMG QAFNMVRSGM
SRVMLTGGSE AMLCFGGIKA WEGLRVMSKD ACRPFSLNRN GMVQGEGAAI FVFEEYEHAR
ARGADILAEV IGFAMTSDAS DIVMPSKLGA ARAIEGALRD AKLNPEAVGY INAHGTGTAA
NDKTECAAVA DVFGHHADRL MISSTKSMHG HLIGGTGAVE LLACILALRE GVIAPTIGYE
EPDPECALDV VPNVAREARV DVVLSNAFAF GGLNAVLALR RV