Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_1038 |
Symbol | |
ID | 5084655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1064362 |
End bp | 1065570 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640482595 |
Product | beta-ketoacyl synthase |
Protein accession | YP_001167244 |
Protein GI | 146277085 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAG TGGTCATTAC GGGCGCCGGC ACGATCAACG CGCTGGCGCA CGATGTTGCA GGCACGATCG CGGCCTTCCG AGAGGGCCGG TGCGGGATCA CCGATCTCGA CATCCGCGAC AAGGAGCGGC TGTCGATCCA GATCGGTGGG CAGGTCCACA ACTGGGATCC CGAGGCGCAT TTCAACCGCC AGCAGATCGT CCTCTACGAC AAGTTCACCC AGTTCACGCT TCTGGCGGCC CGCGAGGCGG TGGCGCAGTC GGGGCTGACC TTTGCCGGCA GTCTGGGGCT GGAGGCCGGG GTGATCCTCG GCACCGCGGG CGGCGGGGTG AACACCTGGG ACGAAAATTA CCGCGTGGTC TATGAAGAGG GGAAGAACCG CGTCCATCCG TTCGTCGTGC CCAAACTGAT GAACAACGCG GCCGCCTCGC ATGTCTCGAT GGAGTTCCAG CTCCGCGGGC CGTCCTTCAC GGTGGCGACC GCCTGCGCCA GTTCGAACCA TGCGATGGGG CAGGCCTTCA ACATGGTCCG TTCGGGCATG AGCCGGGTCA TGCTGACCGG CGGATCCGAG GCCATGCTCT GCTTCGGCGG GATCAAGGCG TGGGAGGGGC TGCGCGTCAT GTCGAAGGAC GCCTGCCGGC CCTTCTCGCT GAACCGCAAT GGCATGGTGC AGGGCGAGGG CGCGGCGATC TTCGTCTTCG AAGAATACGA GCACGCCCGT GCGCGCGGCG CCGATATCCT GGCCGAGGTG ATCGGCTTTG CCATGACCTC GGACGCGTCC GACATCGTGA TGCCCTCGAA GCTGGGGGCG GCGCGCGCCA TCGAGGGGGC GCTGCGCGAT GCGAAGCTCA ATCCCGAGGC GGTGGGCTAC ATCAACGCCC ACGGCACCGG CACGGCGGCC AACGACAAGA CCGAATGCGC GGCGGTGGCG GATGTGTTCG GCCATCACGC CGACCGGCTG ATGATCTCGT CCACCAAGTC GATGCACGGC CACCTGATCG GCGGGACGGG CGCGGTGGAG CTGCTGGCCT GCATCCTCGC CCTGCGCGAA GGGGTGATTG CGCCGACGAT CGGCTATGAG GAGCCCGACC CGGAATGTGC GCTGGATGTC GTGCCGAACG TGGCGCGCGA GGCGCGGGTG GATGTGGTGC TCTCGAACGC CTTTGCCTTT GGCGGGCTGA ACGCGGTCCT CGCGCTGCGC CGCGTCTGA
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Protein sequence | MKRVVITGAG TINALAHDVA GTIAAFREGR CGITDLDIRD KERLSIQIGG QVHNWDPEAH FNRQQIVLYD KFTQFTLLAA REAVAQSGLT FAGSLGLEAG VILGTAGGGV NTWDENYRVV YEEGKNRVHP FVVPKLMNNA AASHVSMEFQ LRGPSFTVAT ACASSNHAMG QAFNMVRSGM SRVMLTGGSE AMLCFGGIKA WEGLRVMSKD ACRPFSLNRN GMVQGEGAAI FVFEEYEHAR ARGADILAEV IGFAMTSDAS DIVMPSKLGA ARAIEGALRD AKLNPEAVGY INAHGTGTAA NDKTECAAVA DVFGHHADRL MISSTKSMHG HLIGGTGAVE LLACILALRE GVIAPTIGYE EPDPECALDV VPNVAREARV DVVLSNAFAF GGLNAVLALR RV
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