Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0996 |
Symbol | |
ID | 5083212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1019898 |
End bp | 1020641 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640482553 |
Product | ABC transporter related |
Protein accession | YP_001167202 |
Protein GI | 146277043 |
COG category | [R] General function prediction only |
COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCGC TTCTCGAGGT TTCGGGCGTC TCGGTCACCT TCGACGGCTT CCGCGCCATC AACAACCTGT CCTTCAACAT CGGCGCGCAG GAGTTGCGCG CCATCATCGG GCCGAACGGC GCCGGCAAGA CCACCTTCAT GGACATCGTG ACCGGCAAGA CCCGGCCCGA CGAAGGCTCG GTGACCTTCG GCGAACGCTC GGTCTCGCTG CTCGCCCTGT CCGAGTCGCG GATCGCGCAG GAGGGAATCG GGCGCAAGTT CCAGCGCCCC ACGGTGTTCG AGGATCAGAC GGTCTTCGAC AACCTGATGA TGGCGCTGAA GAAGCCGCGC TCGCCCTTTT CGGTGCTCTT CTTCCGTCCA TCGGGTCGCG ACGCCGCCCG CGTCGAGGAA CTGGCGGCCG AGGTGGGGCT TGGCGATCAT CTCGCGCGCA AGTCGGGCGA GCTGAGCCAC GGGCAGAAAC AATGGCTCGA GATCGGGATG CTTCTCGCGC AGGAGCCGCG GCTTCTGCTG GTGGACGAGC CCGCCGCCGG CATGACGCTG GCCGAGCGCG AACATACCAC GGCGCTTCTG GTCGAGATGG CGAAGACCCG CGCCGTGGTG GTGGTGGAGC ATGACATGGA GTTCGTGCGC CGGCTGAACT GCAAGGTGAC GGTGCTGCAC GAGGGCTCGG TTCTGGCCGA GGGCAGCCTT GACCATGTGA CGAAGAACCC GGCCGTGATC GAAGTCTATC TGGGGCGGGG ATGA
|
Protein sequence | MSALLEVSGV SVTFDGFRAI NNLSFNIGAQ ELRAIIGPNG AGKTTFMDIV TGKTRPDEGS VTFGERSVSL LALSESRIAQ EGIGRKFQRP TVFEDQTVFD NLMMALKKPR SPFSVLFFRP SGRDAARVEE LAAEVGLGDH LARKSGELSH GQKQWLEIGM LLAQEPRLLL VDEPAAGMTL AEREHTTALL VEMAKTRAVV VVEHDMEFVR RLNCKVTVLH EGSVLAEGSL DHVTKNPAVI EVYLGRG
|
| |