Gene Rsph17025_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0996 
Symbol 
ID5083212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1019898 
End bp1020641 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content66% 
IMG OID640482553 
ProductABC transporter related 
Protein accessionYP_001167202 
Protein GI146277043 
COG category[R] General function prediction only 
COG ID[COG4674] Uncharacterized ABC-type transport system, ATPase component 
TIGRFAM ID[TIGR03411] urea ABC transporter, ATP-binding protein UrtD 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC TTCTCGAGGT TTCGGGCGTC TCGGTCACCT TCGACGGCTT CCGCGCCATC 
AACAACCTGT CCTTCAACAT CGGCGCGCAG GAGTTGCGCG CCATCATCGG GCCGAACGGC
GCCGGCAAGA CCACCTTCAT GGACATCGTG ACCGGCAAGA CCCGGCCCGA CGAAGGCTCG
GTGACCTTCG GCGAACGCTC GGTCTCGCTG CTCGCCCTGT CCGAGTCGCG GATCGCGCAG
GAGGGAATCG GGCGCAAGTT CCAGCGCCCC ACGGTGTTCG AGGATCAGAC GGTCTTCGAC
AACCTGATGA TGGCGCTGAA GAAGCCGCGC TCGCCCTTTT CGGTGCTCTT CTTCCGTCCA
TCGGGTCGCG ACGCCGCCCG CGTCGAGGAA CTGGCGGCCG AGGTGGGGCT TGGCGATCAT
CTCGCGCGCA AGTCGGGCGA GCTGAGCCAC GGGCAGAAAC AATGGCTCGA GATCGGGATG
CTTCTCGCGC AGGAGCCGCG GCTTCTGCTG GTGGACGAGC CCGCCGCCGG CATGACGCTG
GCCGAGCGCG AACATACCAC GGCGCTTCTG GTCGAGATGG CGAAGACCCG CGCCGTGGTG
GTGGTGGAGC ATGACATGGA GTTCGTGCGC CGGCTGAACT GCAAGGTGAC GGTGCTGCAC
GAGGGCTCGG TTCTGGCCGA GGGCAGCCTT GACCATGTGA CGAAGAACCC GGCCGTGATC
GAAGTCTATC TGGGGCGGGG ATGA
 
Protein sequence
MSALLEVSGV SVTFDGFRAI NNLSFNIGAQ ELRAIIGPNG AGKTTFMDIV TGKTRPDEGS 
VTFGERSVSL LALSESRIAQ EGIGRKFQRP TVFEDQTVFD NLMMALKKPR SPFSVLFFRP
SGRDAARVEE LAAEVGLGDH LARKSGELSH GQKQWLEIGM LLAQEPRLLL VDEPAAGMTL
AEREHTTALL VEMAKTRAVV VVEHDMEFVR RLNCKVTVLH EGSVLAEGSL DHVTKNPAVI
EVYLGRG