| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0978 |
|---|
| Symbol | |
|---|
| ID | 5083194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 1002875 |
|---|
| End bp | 1003618 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640482535 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001167184 |
|---|
| Protein GI | 146277025 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.159022 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATT TGCCCGACAC TTTTTCCAAG TCCCTGAACT CCATCGGCGC CGATCTGCCC
GGATCGGCCG GTGTCTGTCT CTCGGAACGT TGCACCCTGA TCATGATCGA CCCCCGGACG
CTCGAGCGTG AGTGTCTTGT CCGTTGCGTC GAACTCGCTC ATCCCGAGAT CAAGGTCATG
GGCTTCGGCT CGATCGACGA GTGGCAGAAC CGCCGCGACC GCCACGGGCA CGAGGTGATC
CTCTACAGCA CCGGCAATCG CCCGGTGACG GAGGTCTCCC GGGAAATCGC GACGCTTGTT
GCGGAGGCCG GCGTTGCGCC GGTCGTCGTG ATCGGCGCCG CCAACGATCT GCGCGAGATG
ATCGCGGCCT TCGATTGCGG AGCACGCAGC TATCTGCCCT CCTCGGTCGG CATCGACGAT
ATCGTCGAGG CGAGCCGCCT TGCGTCCTTC GACGGGATCT TCCTGCCGAC GGCGAGCCTG
ACGGCCCTGC GCGGCGCCCT TCCCGACCGG GAAGAGTCGC ACATGGCCGT GAACGAGCAC
CTGACCGAGC GCCAGCGGGC CGTCTGTGAC GCGCTCCGCC GGGGCAAGTC CAACAAGATC
ATCGCGGGAG AGCTCAATCT CTGCGAGAGC ACCGTGAAGG TCCATATCCG CAACATCATG
AAGAAGCTGG GCGCGAAAAA CCGCACCGAG GCTGCCTTCA AGCTGAATTC CAGCATGTTT
GCGGGGGAAG GTCGCCTCTC CTGA
|
|---|
| Protein sequence | MKHLPDTFSK SLNSIGADLP GSAGVCLSER CTLIMIDPRT LERECLVRCV ELAHPEIKVM
GFGSIDEWQN RRDRHGHEVI LYSTGNRPVT EVSREIATLV AEAGVAPVVV IGAANDLREM
IAAFDCGARS YLPSSVGIDD IVEASRLASF DGIFLPTASL TALRGALPDR EESHMAVNEH
LTERQRAVCD ALRRGKSNKI IAGELNLCES TVKVHIRNIM KKLGAKNRTE AAFKLNSSMF
AGEGRLS
|
|---|
| |