15 homologs were found in PanDaTox collection
for query gene Rsph17025_0965 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009049  Rsph17029_1975  hypothetical protein  80.08 
 
 
469 aa  678    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.898955  normal  0.425307 
 
 
-
 
NC_009428  Rsph17025_0965  hypothetical protein  100 
 
 
472 aa  924    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009430  Rsph17025_4176  hypothetical protein  45.86 
 
 
458 aa  327  2.0000000000000001e-88  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0330  hypothetical protein  89.55 
 
 
134 aa  240  4e-62  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.431782  n/a   
 
 
-
 
NC_011369  Rleg2_1207  hypothetical protein  31.41 
 
 
799 aa  97.1  6e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.907173  normal 
 
 
-
 
NC_012850  Rleg_1296  hypothetical protein  30.81 
 
 
791 aa  97.1  6e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.339061  normal 
 
 
-
 
NC_009621  Smed_5211  hypothetical protein  28.95 
 
 
705 aa  93.6  8e-18  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5538  cellulose synthesis protein  30.43 
 
 
760 aa  92.4  2e-17  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0104  hypothetical protein  27.42 
 
 
982 aa  70.1  0.00000000007  Methylobacterium sp. 4-46  Bacteria  normal  0.351566  normal 
 
 
-
 
NC_010172  Mext_1370  hypothetical protein  29.79 
 
 
687 aa  67  0.0000000007  Methylobacterium extorquens PA1  Bacteria  normal  0.103555  normal  0.0562053 
 
 
-
 
NC_011757  Mchl_1570  hypothetical protein  29.26 
 
 
654 aa  63.2  0.00000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0379435  normal 
 
 
-
 
NC_010725  Mpop_1315  hypothetical protein  28.42 
 
 
678 aa  62.4  0.00000002  Methylobacterium populi BJ001  Bacteria  normal  0.27313  normal 
 
 
-
 
NC_011894  Mnod_3738  hypothetical protein  30.59 
 
 
664 aa  61.2  0.00000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4802  hypothetical protein  28.4 
 
 
652 aa  60.1  0.00000009  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.653605  normal 
 
 
-
 
NC_010505  Mrad2831_0272  hypothetical protein  28.57 
 
 
669 aa  55.8  0.000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.937532  normal 
 
 
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