Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0925 |
Symbol | |
ID | 5083402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 944658 |
End bp | 945440 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640482483 |
Product | ABC transporter related |
Protein accession | YP_001167132 |
Protein GI | 146276973 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0463719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGCAG TCGAGAACCT GCACAGGCAC TTCGGCGGTT TCCGCGCCGT GGACGGCGCC TCGCTGCAGA TCGCCACCGG CTCGATCACC GGGCTGATCG GACCGAACGG GGCGGGCAAG ACCACGCTCT TCAACGTGAT CGCCGGGCGG CTGAAGCCGA CCTCGGGCCG CGTCACGATG GACGGCGAGG AGATCACCGG CCTGCCGCCG CACGAGCTGT TCCACAAGGG CCTTCTGCGC ACCTTCCAGA TCGCGCACGA GTTCGGCTCG ATGAGCGTGC GGGAAAATCT CATGATGGTT CCGGCCCGGC AGTCCGGCGA GACGCTGTGG AACGCCTGGT TCCGGCGGAG CGCGGTGGAG GCCGAAGAGC GGCGCCTGCG CGACAAGGCC GACGAGGTGC TGGAGTTCCT GACGATCTCG CATCTCGCCG ACGAGAAGGC CGCCAACATC TCGGGCGGGC AGAAGAAGCT CCTGGAGCTT GGCCGCACCA TGATGGTGGA TGCCAAGATC GTGTTCCTTG ACGAGGTGGG CGCGGGCGTG AACCGGACAC TTCTCAACAC GATCGGCGAC GCCATCGTGC GGTTGAACGA GGAGCGCGGC TATACGTTCT GCGTGATCGA GCACGACATG GATTTCATCG CCCGCCTCTG CAACCCGGTC ATCTGCATGG CCGAGGGCAA GGTCCTGGCG GAAGGCACGG TCGAGGAAGT GAAGAATGAC GAGCGGGTGA TCGAGGCGTA TCTCGGCACC GGCCTCAAGA ACAAGGTGGC GGGTCATGCG TGA
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Protein sequence | MIAVENLHRH FGGFRAVDGA SLQIATGSIT GLIGPNGAGK TTLFNVIAGR LKPTSGRVTM DGEEITGLPP HELFHKGLLR TFQIAHEFGS MSVRENLMMV PARQSGETLW NAWFRRSAVE AEERRLRDKA DEVLEFLTIS HLADEKAANI SGGQKKLLEL GRTMMVDAKI VFLDEVGAGV NRTLLNTIGD AIVRLNEERG YTFCVIEHDM DFIARLCNPV ICMAEGKVLA EGTVEEVKND ERVIEAYLGT GLKNKVAGHA
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