Gene Rsph17025_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0925 
Symbol 
ID5083402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp944658 
End bp945440 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID640482483 
ProductABC transporter related 
Protein accessionYP_001167132 
Protein GI146276973 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0463719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCAG TCGAGAACCT GCACAGGCAC TTCGGCGGTT TCCGCGCCGT GGACGGCGCC 
TCGCTGCAGA TCGCCACCGG CTCGATCACC GGGCTGATCG GACCGAACGG GGCGGGCAAG
ACCACGCTCT TCAACGTGAT CGCCGGGCGG CTGAAGCCGA CCTCGGGCCG CGTCACGATG
GACGGCGAGG AGATCACCGG CCTGCCGCCG CACGAGCTGT TCCACAAGGG CCTTCTGCGC
ACCTTCCAGA TCGCGCACGA GTTCGGCTCG ATGAGCGTGC GGGAAAATCT CATGATGGTT
CCGGCCCGGC AGTCCGGCGA GACGCTGTGG AACGCCTGGT TCCGGCGGAG CGCGGTGGAG
GCCGAAGAGC GGCGCCTGCG CGACAAGGCC GACGAGGTGC TGGAGTTCCT GACGATCTCG
CATCTCGCCG ACGAGAAGGC CGCCAACATC TCGGGCGGGC AGAAGAAGCT CCTGGAGCTT
GGCCGCACCA TGATGGTGGA TGCCAAGATC GTGTTCCTTG ACGAGGTGGG CGCGGGCGTG
AACCGGACAC TTCTCAACAC GATCGGCGAC GCCATCGTGC GGTTGAACGA GGAGCGCGGC
TATACGTTCT GCGTGATCGA GCACGACATG GATTTCATCG CCCGCCTCTG CAACCCGGTC
ATCTGCATGG CCGAGGGCAA GGTCCTGGCG GAAGGCACGG TCGAGGAAGT GAAGAATGAC
GAGCGGGTGA TCGAGGCGTA TCTCGGCACC GGCCTCAAGA ACAAGGTGGC GGGTCATGCG
TGA
 
Protein sequence
MIAVENLHRH FGGFRAVDGA SLQIATGSIT GLIGPNGAGK TTLFNVIAGR LKPTSGRVTM 
DGEEITGLPP HELFHKGLLR TFQIAHEFGS MSVRENLMMV PARQSGETLW NAWFRRSAVE
AEERRLRDKA DEVLEFLTIS HLADEKAANI SGGQKKLLEL GRTMMVDAKI VFLDEVGAGV
NRTLLNTIGD AIVRLNEERG YTFCVIEHDM DFIARLCNPV ICMAEGKVLA EGTVEEVKND
ERVIEAYLGT GLKNKVAGHA