| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0853 |
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| Symbol | |
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| ID | 5083580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 871733 |
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| End bp | 873004 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640482411 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_001167062 |
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| Protein GI | 146276903 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATA TGACAACCTA TGACGTCATG GAGAGTGCGC GCAACACCAA CGAGTGGTTG
GGCGCGACCG CAAGGGCCAT GGCCTCCTAT CCACTCTTTG CCCTTTCGAT GAATCCCATG
CTGGCGCTGA CCGCCGCCTG GGGAGAGGTG ACAGAGCGCA GCTTCGCCCG GATGGTCGCC
AAGCCCGACT GGGGCATCCG CTCGATCGTG GGCGAGGACG GGCAGGACCA TCTGGTCGAT
GTGAAGACCA TCGTGGAAAA GCCTTTCGGC AACCTCATAC AGTTCTTCGT CCGCCGCCGG
CCCCCGATGG CCCGCAAGGT GCTGCTGGTG GCCCCCATGT CGGGCCACTA CGCGACGCTC
CTGCGCTCGA CCGTGCTCAG TCTGCTGCCG GACTGCGACG TCTATGTGAC GGACTGGCAC
AATGCGCGGG ACATTCCGGT GTCCTGCGGC AAGTTCGACG TCGAGGATTA CACCCTCTAT
GTCGTCGAGT TCATGCGCGC CCTCGGCCCC GACACCAACG TGATCGCCAT CTGCCAGCCG
GCGCCGCTCG TGCTCGCCGC CACGGCCTAT CTGGCGGGCG AGGATCCGGC GGCGCAACCG
CGGACCCTCA CGCTCATCGG TGGCCCGATC GACCCGGATG CGGCCGCGAC CGAAGTGACG
GATTTCGGCC GCCGCGTCAC GATGGGCCAG CTCGAGCAAC TCGCCATCCA GCGCGTCGGC
TTCAAGTACA TGGGCGCCGG GCGGCTGGTC TATCCGGGCC TCCTCCAGCT TCAGAGCTTC
ATCTCGATGA ACATGGAACG CCATTCCAAG GCGTTTCAGG AGCAGATCGT GCGCGTGGCG
CGCGGGCAGG CGTCGGACCA CGACGCGCAC AACCGCTTCT ACGACGAATA CCTCGCCGTG
ATGGACATGA CGGCCGAGTT CTACCTCTCG ACCGTCGAGC GGGTGTTCAA GAACCGCGAG
ATCGCGAAGA ACGAGTTCAC GGTCGCGGGC AAGCGGGTGG ATATCGGCGC GATCACCGAT
GTGGCGGTGA AGACGGTCGA GGGCGAGAAG GACGACATCT CGGCTCCCGG CCAGTGCATC
GCCGCGCTGA ACCTGCTGAC GGGTCTGCCG GACTCGAAGA AGGCAAGCCA CCTCGAGCCC
GACGCCGGCC ACTACGGCAT CTTCGCGGGC AAGAGCTGGC GGCTCAACAT CCGCCCGCTG
GTGCTGCGCT TCATCGACGC GAACGCCCCA AAGCCGAAAC CCAAGATCGT CCCCGCGGCC
GTGGCGGGCT GA
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| Protein sequence | MKYMTTYDVM ESARNTNEWL GATARAMASY PLFALSMNPM LALTAAWGEV TERSFARMVA
KPDWGIRSIV GEDGQDHLVD VKTIVEKPFG NLIQFFVRRR PPMARKVLLV APMSGHYATL
LRSTVLSLLP DCDVYVTDWH NARDIPVSCG KFDVEDYTLY VVEFMRALGP DTNVIAICQP
APLVLAATAY LAGEDPAAQP RTLTLIGGPI DPDAAATEVT DFGRRVTMGQ LEQLAIQRVG
FKYMGAGRLV YPGLLQLQSF ISMNMERHSK AFQEQIVRVA RGQASDHDAH NRFYDEYLAV
MDMTAEFYLS TVERVFKNRE IAKNEFTVAG KRVDIGAITD VAVKTVEGEK DDISAPGQCI
AALNLLTGLP DSKKASHLEP DAGHYGIFAG KSWRLNIRPL VLRFIDANAP KPKPKIVPAA
VAG
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