| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0572 |
|---|
| Symbol | |
|---|
| ID | 5082877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 572686 |
|---|
| End bp | 573405 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640482127 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001166783 |
|---|
| Protein GI | 146276624 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.916806 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCCTTCT CGCGCCGTTA TGCCGAATGT CTTGCCGCTC CGCTGCCCTG GATCGTCTGG
GCGGCCCTTT CTGTCGGTCT GGCCGTCTCG GGTCCGTTCG GCAGCTATCA GACCGTGGCC
CTGCCCGAAC GTCTCCTGGT GTGGAGCGCG CTGGTCGCCA TCACGCTCGG GCTGGGGCTT
GCCCTTCGGA TCTGGTTCGC CTCGGCGGGC CTGCGCGAGC TGAGGCGCGG GGCGGGGCTG
GCGCTTGCCG TCGCGGCGTT CCTCACGCTG CCGATCTGGT GGCTCATGCG CCTCGCCTTC
GGCCCCGAGG CGCCGAGCGC GGTCGAGGTG GCGCCCGCGC TCTTCTGCGC GGCGCTGGGT
CTGTCGGCCT TCCGCGTGGG CACGCGGCCG CAGCCCTCCC GGGACGGCAC CCCGCGCCTC
CTGCAGCGGA TGGAGCCGGG CCAGCGCGGC GAGCTGATCT CGATCTCGGT CCGGGATCAT
TATGTGGATG TGATGACGAG CGCGGGCCTC GGGAGCCTCT TGCTGCGCTT TTCGGACGCG
ATGGATGAAA CCGAGGGCGT GCCGGGGGCG CAGGTCCACC GCTCGCACTG GGTGGCCTGG
TCGGCCGTCA CCGGGGTCGA GCGCGGGCCG GGCAAGCTGT TCCTGCTGCT GAGGGACGGC
AGCCGCATTC CCGTCAGCCG TGCTCACCGC GCAAAGCTGG AAGAGCGCGG CCTGATTTGA
|
|---|
| Protein sequence | MSFSRRYAEC LAAPLPWIVW AALSVGLAVS GPFGSYQTVA LPERLLVWSA LVAITLGLGL
ALRIWFASAG LRELRRGAGL ALAVAAFLTL PIWWLMRLAF GPEAPSAVEV APALFCAALG
LSAFRVGTRP QPSRDGTPRL LQRMEPGQRG ELISISVRDH YVDVMTSAGL GSLLLRFSDA
MDETEGVPGA QVHRSHWVAW SAVTGVERGP GKLFLLLRDG SRIPVSRAHR AKLEERGLI
|
|---|
| |