| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0485 |
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| Symbol | |
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| ID | 5082844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 481890 |
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| End bp | 483347 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640482039 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001166696 |
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| Protein GI | 146276537 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.148929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCT CCCGGCGCTG GCTGCTGGCC GCGCTTCTCG CGGGCGCCGC CACGCCCGCG
CTGCCCGATG CGCCCCTCAC ATCGCCCCGC CCGCCGCGCC GCGGCTTCGT CGAGCCGCCG
CCCGACGTCG ACAGCCTCAT CGCACGGGCC TCGCTCGGCG GTGCGGTGGC CTTCGCCGTG
GCCGATGCCG CCACCGGCGA ACTGCTCGAG GCCCGCAACG CCGCGCTGCG CCTGCCGCCC
GCCAGCACCG CCAAGGCCAT CACCGCACTC TACGCGCTCG AGACGCTCGG TGCCGACTTC
CGCTTCGCCA CGCGCCTCCT CGCCACCGGG CCGGTCCGGG ACGGGATCGT GCAGGGCGAC
CTCGTGCTGT CGGGCGCGGG CGATCCCACG CTCTCCACCG ATGCGCTCGG CGACATGGCG
GCGAAGCTGC ACGCGTCCGG GGTGCGCGGG GTGACGGGGC GCTACATCGC CGATGCGAGC
GCCTTGCCCG CGGTGCCGCT GATCGATCCC GAGCAGCCCG CCCATGTCGG CTACAATCCC
GCCCTCTCCG GCCTGAACCT GAACTTCAAC CGGGTCCATT TCGAATGGAG GCGGGCGAAG
ACCGGCTGGT CCGTCACGAT GGATGCCCGG GCCGAGCGGT TCGTGCCCCA GGTCGCGATG
GCCCGGATGG AGGTCGTCAC CCGCGACCTG CCGATCTACA CCTACGCCGG CGATCAGGGC
TCGGACAGCT GGACCGTCGC CAGCAGCGCG CTCGGCAAGG CGGGAAGCCG CTGGCTTCCG
GTGCGCCACC CCGAGACCTA CACCGCCGAG GTCTTCCAGA CGCTGGCCCG GGCGCAGGGC
ATCACCCTGC CCGACGCGCA GATCGTGCGG GTCCGCCCCG AGGGCACGAG CCTCGTCGAA
TGGCAAAGCC AGCCCCTGCG CGAGATCCTG CGCGACATGC TGAAGTTCTC CACCAACATC
ACGGCCGAGG CGGTGGGGCT GGCCGCCTCG GGCGCGCCCT CCCTCGGCCA GTCGGCGGCC
GCGATGAGCG CCTGGGTCAA CGGCCGCTTC GGCCTCTCCA CCGCGTTCCA GGACCATTCC
GGACTCGGAG GCGGCTCGCT CGTCTCGGCG CGCGACATGG TGACGGCGCT GCTCGCAGCC
GAACGCGAGG GGCTTGGCCT GCGCGAGATC CTCAAGCGGA CGGACCTGGT CGATCCCGGA
GGTGCGAGGA CGCGCAGGCC TCCCATCGCG GTCGCGGCCA AGACCGGCAC GCTGAACTTC
GTCTCGGGGC TCGCGGGCAT CGCCCGCGCC GAGGGAGGCC GCGACCTCGT CTTTGCGATC
TACTGCGCCG ACCGCGCCCG TCGCTCGGCC CTGCCGATGG ACGCGCGTGA GCGCCCGCCC
GGCGGGTCCG AGTGGCTCGG CCGTGCCCGT GGCCTGCAGC GTGCCCTCAT CGAACGCTGG
GCCGCACTGC CCGCCTGA
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| Protein sequence | MTVSRRWLLA ALLAGAATPA LPDAPLTSPR PPRRGFVEPP PDVDSLIARA SLGGAVAFAV
ADAATGELLE ARNAALRLPP ASTAKAITAL YALETLGADF RFATRLLATG PVRDGIVQGD
LVLSGAGDPT LSTDALGDMA AKLHASGVRG VTGRYIADAS ALPAVPLIDP EQPAHVGYNP
ALSGLNLNFN RVHFEWRRAK TGWSVTMDAR AERFVPQVAM ARMEVVTRDL PIYTYAGDQG
SDSWTVASSA LGKAGSRWLP VRHPETYTAE VFQTLARAQG ITLPDAQIVR VRPEGTSLVE
WQSQPLREIL RDMLKFSTNI TAEAVGLAAS GAPSLGQSAA AMSAWVNGRF GLSTAFQDHS
GLGGGSLVSA RDMVTALLAA EREGLGLREI LKRTDLVDPG GARTRRPPIA VAAKTGTLNF
VSGLAGIARA EGGRDLVFAI YCADRARRSA LPMDARERPP GGSEWLGRAR GLQRALIERW
AALPA
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