Gene Rsph17025_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0422 
Symbol 
ID5082510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp418383 
End bp418856 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content67% 
IMG OID640481974 
ProductNusB antitermination factor 
Protein accessionYP_001166633 
Protein GI146276474 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0610672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGA AACCCGACAA GCGGCAGATG AAATCGGCCT CGCGGCTCTA TGCGGTGCAG 
GCGCTCTTCC AGATGGAATG CTCCGGCCAG ACGGTCGAGC AGGTCGCGCG GGAGTTCGAG
ACCCATCGGT TCGGCGCGAT CTACGAGGGC GATGAGATGG CCGAGGGCGA CGCCCGCAGC
TTTCGCAGCA TCGTCTCGGG CGCGGTGAAC CGTCAGGCGG GCATCGACCA GTTGACCGAT
CGGGCGCTGG TCGCCAAATG GCCGATCGAC CGGATCGACC CGGTGATCCG CGCGCTCTTC
CGGGCCGCGG GCTCGGAGCT GCTCGAGAGC GACACGCCGC CCAAGGTGGT GATCAACGAG
TTCGTGGACA TCGCCAAGGC CTTCTTTCCC GATGGGCGCG AGCCCAAGTT CGTGAATGCG
GTGCTCGATC ACATGGCGCG CGAGGCCAGG CCCGAGGCCT TCCCGCAGGG CTGA
 
Protein sequence
MSVKPDKRQM KSASRLYAVQ ALFQMECSGQ TVEQVAREFE THRFGAIYEG DEMAEGDARS 
FRSIVSGAVN RQAGIDQLTD RALVAKWPID RIDPVIRALF RAAGSELLES DTPPKVVINE
FVDIAKAFFP DGREPKFVNA VLDHMAREAR PEAFPQG