Gene Rsph17025_0421 details

Gene Information

• Locus tag: Rsph17025_0421
• Symbol: ribH
• ID: 5082509
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides ATCC 17025
• Kingdom: Bacteria
• Replicon accession: NC_009428
• Strand: +
• Start bp: 417850
• End bp: 418386
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640481973
• Product: 6,7-dimethyl-8-ribityllumazine synthase
• Protein accession: YP_001166632
• Protein GI: 146276473
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0054] Riboflavin synthase beta-chain
• TIGRFAM ID: [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.0658138
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCGGTT CCGAATCCCA CTACAGCCTG CCGCTGCCCG CCTTCGACAA GCCCGCCCGG 
CTTCTGATCG TGGTGGCGCC CTATTACCGC GACATCGCCG ACGATCTGAT CGCCGGCGCC 
AAGGCCGTGA TCGAAGGCTG CGGCGCAAGC TGGGACCTGG TCGAGGTGCC GGGGGCGCTG 
GAGCTGCCCA CGGCCATCGC CATGGCCGAG CGTCAGGCGA ATTTCGACGG CTATGTCGCG 
CTCGGCTGCG TGATCCGCGG CGAGACCACC CACTACGACA CGGTCTGCAA CGATTCGAGC 
CGCGGGCTGA TGCTCCTCGG CCTGCAGGGT GCCTGCATCG GCAACGGCAT CCTCACGGTC 
GAGAATCGCG AGCAGGCGGT TGTGCGCGCC GCACCCTCCG GCCAGGACAA GGGCGGCGGG 
GCCGCGGCCG CCGCGCTGCA TCTGATCGCC CTCTCGCGGC AGTGGTCGGG CCAGCGCAAG 
GGCATGGGCT TCAAGCCGGT GGACGAGTTC CGCCTTGCCG GGAAGACCGA AGCATGA 

 

Protein sequence

MAGSESHYSL PLPAFDKPAR LLIVVAPYYR DIADDLIAGA KAVIEGCGAS WDLVEVPGAL 
ELPTAIAMAE RQANFDGYVA LGCVIRGETT HYDTVCNDSS RGLMLLGLQG ACIGNGILTV 
ENREQAVVRA APSGQDKGGG AAAAALHLIA LSRQWSGQRK GMGFKPVDEF RLAGKTEA