Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0416 |
Symbol | |
ID | 5082504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 412755 |
End bp | 413888 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640481968 |
Product | polysaccharide export protein |
Protein accession | YP_001166627 |
Protein GI | 146276468 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.482624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.901304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACATTTT CGGCAGTCAG GGGCGCGAAG ACGCTCACCC TTCTCTTGCT CGTGTCCTCG GTCGCCGCCT GCGGCCTGCC CCGCTCGGGC CCGCACAAGC GTGAGATCTT CGCCGGCTCC TTCGAGAAGC AGGGCGATGC CTTCGTGGTC CCGGTGAACC GCTTCGTCAG CAGGGTGACC GCCGTGACCC CGGCCTTTGG ATTCAATTCG AATTTCCGCA GCGCCGATCT CATAGGCTCG GATGTGATCG CGGCCGGCGA CACGCTCGGC ATCACCGTGT TCGAGAACGT GCGCGACGAT CCGCTGCTCG GCAACTCCGG CCAACGCGTG TCCTCGCTCG ATCAGGTGCA GGTCGATGGG CAGGGCTATA TCTACGTCCC CTATGCCGGC CGCATCCGCG CCGCAGGTCA GACGCCCGAC AGGCTCCGTC AGGCCATCAC CCGCAAGCTC GACACACAGA CCCCGGACCC GCAGGTGTCG GTCCAGCGTC TCGCCGGGGA CGGCTCGTCC GTCACGGTCT CGGGCGCGGT GGGCAGCCAG GGCGTCTTCC CGATCGAGCG CCCCACCCGC ACCCTTTCAG CCATGCTGGC CCGTGCCGGC GGGACCAGTG TTCCCGTCGA GACCGCCATC GTGCGCGTCA CGCGCAACGG CAACACCAGC CAGATCTGGC TGCAGGACCT CTATGACAAT CCCGCGCTCG ACATTGCCCT GCGGCCGGGC GATGTGATCG TGATCGAGGA GGACGACCGG TCCTTCGTGG CCCTCGGCGC GACGGGCCAT CAGACCCGTA TCCAGTTCGA GACGCAGAAT GTCTCGGCCA TCGAGGCGCT TGCGCAGGTC GGCGGCCTCA ACACCCAACT GGCCGATCCG AAGGGCGTCT TCGTGCTGCG GGACGAACCG GCCGAGATCG CCAACAGCCT GCTGGGGCGC ACGGATCTCG TGGGCGATCA GCGCATGGTC TATGTGCTCG ACCTGACACG GCCGACGGGC CTGTTCGAGG CGCGCGACTT CATGATCCGT GACGGCGATA CGGTCTATGT GACCGAAGCG CCCTTCGTCC AGTGGCAGAA GACGCTCAGC GCGATCACCG GGGCGACGTC TGCCGCCAAT CAGGCGTCCA ACGTCGGGAA CTGA
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Protein sequence | MTFSAVRGAK TLTLLLLVSS VAACGLPRSG PHKREIFAGS FEKQGDAFVV PVNRFVSRVT AVTPAFGFNS NFRSADLIGS DVIAAGDTLG ITVFENVRDD PLLGNSGQRV SSLDQVQVDG QGYIYVPYAG RIRAAGQTPD RLRQAITRKL DTQTPDPQVS VQRLAGDGSS VTVSGAVGSQ GVFPIERPTR TLSAMLARAG GTSVPVETAI VRVTRNGNTS QIWLQDLYDN PALDIALRPG DVIVIEEDDR SFVALGATGH QTRIQFETQN VSAIEALAQV GGLNTQLADP KGVFVLRDEP AEIANSLLGR TDLVGDQRMV YVLDLTRPTG LFEARDFMIR DGDTVYVTEA PFVQWQKTLS AITGATSAAN QASNVGN
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