Gene Rsph17025_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0298 
Symbol 
ID5084156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp295489 
End bp296334 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID640481853 
Producthypothetical protein 
Protein accessionYP_001166513 
Protein GI146276354 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACC CTGTCCTGAC CGCCTTGTGC CTTGCCGGCA CGACCATGTT GAGTGCCTGT 
GGCGGCCGTG ATGCCGATGT GGATCGCGCC CTGAAGGGCG TCAACATCAT CGACGAAAGC
AACCTCAACG ACATCATGCT GACCGTCGGG GCGCCGGACG AGGCGGTGGC CTATTTCCGC
GGCGCCGTGG ACAAGGCCCC GGACCGGATC GACCTCAAGC GCGGGCTGGC GAAGTCGTTG
GTGCGCGCGC AGCGTCCGGC CGAGGCGGCA ACGGTCTGGA GTCAGGTGGT CAACACCCAC
GAGGGCACGA ACGAGGATCG CGTGGCCTTC GCCGACGCGC TGATCCGGGC GAATGACTGG
AGCCGGGCCG AGCAGGAGCT GGCCAGCATC CCCCCCACCT ACGAGACCTT CCAGCGGTAT
CGGCTCGAGG CGATGGTGGC CGACAGCCGG AAGCAGTGGA AGAAGTCGGA CAGTTATTAC
GAGACCGCCG TCGGCATGAC GACCCAGCCC GCCGGCGTGC TGAACAACTG GGGCTTCTCC
AAGCTGACGC GCGGCGATGC GGCCGCGGCC GAGCGGCTGT TCTACGAGGC GCTGACCTAC
GACCCGACCT CGTTCACCAC CAAGAACAAC CTCGTGCTGG CCCGCGGCGC CCAGCGGAAA
TACGACCTTC CCGTGATTCA GATGACCCAG AAGGAGCGGG CCGAGCTGAT CTACACGCTC
GCCCTGGCCG CGGTGAAGAA GGGCGATGTG ACCGTGGGCA AGGGGCTGCT GCAATCGGCG
ATCGACACGC ATCCGCAATA TTTCGAGGCG GCCGTCCGCA GCCTCGAGGC GCTCGACGCG
GGCTGA
 
Protein sequence
MRHPVLTALC LAGTTMLSAC GGRDADVDRA LKGVNIIDES NLNDIMLTVG APDEAVAYFR 
GAVDKAPDRI DLKRGLAKSL VRAQRPAEAA TVWSQVVNTH EGTNEDRVAF ADALIRANDW
SRAEQELASI PPTYETFQRY RLEAMVADSR KQWKKSDSYY ETAVGMTTQP AGVLNNWGFS
KLTRGDAAAA ERLFYEALTY DPTSFTTKNN LVLARGAQRK YDLPVIQMTQ KERAELIYTL
ALAAVKKGDV TVGKGLLQSA IDTHPQYFEA AVRSLEALDA G