Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0298 |
Symbol | |
ID | 5084156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 295489 |
End bp | 296334 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640481853 |
Product | hypothetical protein |
Protein accession | YP_001166513 |
Protein GI | 146276354 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCACC CTGTCCTGAC CGCCTTGTGC CTTGCCGGCA CGACCATGTT GAGTGCCTGT GGCGGCCGTG ATGCCGATGT GGATCGCGCC CTGAAGGGCG TCAACATCAT CGACGAAAGC AACCTCAACG ACATCATGCT GACCGTCGGG GCGCCGGACG AGGCGGTGGC CTATTTCCGC GGCGCCGTGG ACAAGGCCCC GGACCGGATC GACCTCAAGC GCGGGCTGGC GAAGTCGTTG GTGCGCGCGC AGCGTCCGGC CGAGGCGGCA ACGGTCTGGA GTCAGGTGGT CAACACCCAC GAGGGCACGA ACGAGGATCG CGTGGCCTTC GCCGACGCGC TGATCCGGGC GAATGACTGG AGCCGGGCCG AGCAGGAGCT GGCCAGCATC CCCCCCACCT ACGAGACCTT CCAGCGGTAT CGGCTCGAGG CGATGGTGGC CGACAGCCGG AAGCAGTGGA AGAAGTCGGA CAGTTATTAC GAGACCGCCG TCGGCATGAC GACCCAGCCC GCCGGCGTGC TGAACAACTG GGGCTTCTCC AAGCTGACGC GCGGCGATGC GGCCGCGGCC GAGCGGCTGT TCTACGAGGC GCTGACCTAC GACCCGACCT CGTTCACCAC CAAGAACAAC CTCGTGCTGG CCCGCGGCGC CCAGCGGAAA TACGACCTTC CCGTGATTCA GATGACCCAG AAGGAGCGGG CCGAGCTGAT CTACACGCTC GCCCTGGCCG CGGTGAAGAA GGGCGATGTG ACCGTGGGCA AGGGGCTGCT GCAATCGGCG ATCGACACGC ATCCGCAATA TTTCGAGGCG GCCGTCCGCA GCCTCGAGGC GCTCGACGCG GGCTGA
|
Protein sequence | MRHPVLTALC LAGTTMLSAC GGRDADVDRA LKGVNIIDES NLNDIMLTVG APDEAVAYFR GAVDKAPDRI DLKRGLAKSL VRAQRPAEAA TVWSQVVNTH EGTNEDRVAF ADALIRANDW SRAEQELASI PPTYETFQRY RLEAMVADSR KQWKKSDSYY ETAVGMTTQP AGVLNNWGFS KLTRGDAAAA ERLFYEALTY DPTSFTTKNN LVLARGAQRK YDLPVIQMTQ KERAELIYTL ALAAVKKGDV TVGKGLLQSA IDTHPQYFEA AVRSLEALDA G
|
| |