| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0232 |
|---|
| Symbol | |
|---|
| ID | 5083780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 223155 |
|---|
| End bp | 226004 |
|---|
| Gene Length | 2850 bp |
|---|
| Protein Length | 949 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640481787 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit A |
|---|
| Protein accession | YP_001166447 |
|---|
| Protein GI | 146276288 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.778843 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTTG CGCTGATAGC CGCCCTCCCG TTCCTCGGGG CCCTGCTGCC GGGCCTCATG
ATCCGATCCA GCCGCACAAC CTGCGCCTTC GTCACGGGCA GCGTCACGGC CCTCGCCCTG
CTGATGCTGG GGCTGCATGC CCCGGCCGTC CTGCGCGGCG AGACCGTGCA GACGCGCATC
GAGTGGATGC CCGCGCTGGG TCTGAACGCC AACTTCTTCC TCGACGGGCT CGGCCTCCTG
TTTGCGGGGC TGATCCTCGG GATCGGCCTG CTGATCATCC TCTATGCCCG CTTCTACCTG
TCGAAGCAGG ACTCGATGGG GCAGTTCTAC AGCTACCTCC TGCTCTTCCA GGGGGCGATG
GTGGGGATCG TCCTGTCGGA CAATATCCTG CTCCTGCTGG TCTTCTGGGA GCTGACCTCG
CTCTCCTCCT TCCTTCTCAT CGGCTACTGG AAGCATCTGC CCGCCGGCCG TCAGGGCGCG
CGCATGGCGC TGGCGGTCAC CGGCATGGGC GGGCTCGCGA TGATCGCGGG GATGCTGATC
CTCGGCCAGA TCGCGGGAAG CTACGATCTG ACCGTGATCC TGCAGGAGCG CGACGCGATC
CAGGCGTCGG AATGGTATCT GCCGGCGCTG GTGCTGATCC TGATCGGCTG CTTCACCAAG
TCGGCGCAGT TCCCGTTCCA TTTCTGGCTG CCGCACGCGA TGGCGGCGCC GACGCCGGTC
TCGGCCTACC TGCATTCGGC GACGATGGTG AAGGCGGGCC TCTTCCTCAT GGCGCGGATG
TGGCCGGCGC TGGCCGGAAC GCCCGAGTGG TTCTACCTGG TGGCGACCAC CGGCCTCGTG
ACCATGGTCG TGGCCGCCAA GATCGCGCTC TTCAAGGACG ACCTCAAGGC GCTGCTGGCC
TTCTCGACCG TCTCGCATCT CGGGCTCGTG ACGATGCTGC TGGGCTTCGG CACCCAGTCC
GCCGCCATTG CCGCGATCTT CCACATCATC AACCACGCCA CATTCAAGGC CGCCCTCTTC
ATGACCGCGG GCATCGTGGA TCACGAGACC CACACCCGCG ACCTCAAGCG CCTCGGCGGC
CTGCGCAAGC TGATGCCGAT CACCTTCACC ATCGGCACCC TCGCCGCGCT GTCGATGGCG
GGCATCCCGC CGCTGAACGG CTTCCTCTCC AAGGAGATGA TGCTTGAAGA GGCCGCCCAT
ACGGCCTGGG CCGGGCAGGC CTGGCTGATG CCGGTCTTTG CGACGCTGGG TGCGGTCTTC
TCGGTGGCCT ATTCGCTGCG GTTCGTGGCG CACACGTTCC TCGGGCCGGT GCGCAACGAC
TATCCGCACA ATCCGCACGA TCCGGGCTTC GGCATGTGGG CGGCCCCGGC CTTCCTGGCG
CTGCTCGTGG TGGCGATCGG GATTGCGCCG ATGCCGGTGG CGGGATGGCT CGTCGATGCG
GCGGCGGGCG CCACGACCGG CGAGGCCCTC CATGCCCACA TCTACCACTG GCACGGGCTG
ACGCCGGCCC TCTGGATGTC GATCGCGGCC GTCGGCGGCG GCCTCGTGCT GCTCGGCCTT
CACGCGGGGC TGATGCGCGG CTGGCTCGCC ACGCCGCGGC CCGAGGCCAA GCGGATCTTC
GACGGCATCG TGGACCCTCT CGCGCACTTC TCGCGCAGGT TCTCGCAGGG GCTGCATGAC
GGGGCGCTGA GCCGCTACTT CGCCATCGCC ACCTTCGCGA TGGTCGCCGC CGGAGGCTAC
GCCTTCTTCT CGGGGGGCCA TACGCCCGGC ACGCGGGCTC TGACGCCGGT CGATGTCGTG
CCGGTCATCG GCTGGCTTCT GCTGATCGTA TCGACCTGCA CGCTGGTGAT CGTCCATCAC
AACCGGATCC TCGCGCTGGT CGTGCTGGGG GTGGTGGGCC TCGTCGTCTC GATGGGCTTT
GCCTATCTCT CGGCGCCGGA CCTCGCGCTG ACGCAGATCC TCGTCGAGGT GGCGACGGTG
ATGCTCCTCC TGCTCGCGCT CAACTTCCTG CCCAAGCGGA CACCGATGGA GAGCAAGGCC
CCGCGCCGCA TCCGTGATGC GATCCTGTCG GGCACCGCGG GACTGGGCAT CGGCAGCCTG
ATCTACATGA TGATGACGCG CGACTTCGCT TTCCCGAGCA TCTCCGGCTA TCACCTCGAG
AATGCCAAGA CCGGAGGCGG CGGAACGAAC GTCGTCAACG TCATCCTCGT GGACTTCCGC
GGATATGACA CGTTCGGCGA GATCACCGTC CTCGGCATCG CAGCGCTCGT GATCTTTGCC
GTGACGGAGA CGATCCTGCG GCCGGGCCCG GCCAACAACC GGCTGCTCTC ATGGGCGCAG
GAGCATCGCC ACGCCGGCGA CCGTCATCCG CTGATGCTGG TGGTGGCGAC GCGGATGATG
CTGCCCGTCG CGATCATGGT CGGTGTCTAC ATCTTCCTGC GCGGCCACAA TCTGCCGGGC
GGAGGCTTCA TCGCCGGTCT GGTCGTCGCC ATCGCGGCGC TGATGCAATA CATGGCCTCG
GGCTTCGGCT GGACGGCGGC CCGCAAGCGG GTCGAGTATC ACGCGCTGAT CGCCATGGGC
GTGCTGATCG CGGGCGCGGC CGGCGTCGGC GCCTGGTTCG CCGGGCGGCC GTTCCTGACC
TCGGACTACG GCTATGTCCA CCTGCCCCCG CTCGAAGAGT TCGAACTGGC GACCGCAATG
ATCTTCGACA CCGGCGTGTT CCTCGCTGTT CTGGGGGCGG TGCTGCTGGC GCTCGCCTCG
ATCTCGCGCA TCGCCGTGCG TGCGGGAGAG GAGGTCTCGT CAACTCCCTA CGACATCGAC
CTGCCGCGCG ACCGCTTCGG AGACCGCTGA
|
|---|
| Protein sequence | MSLALIAALP FLGALLPGLM IRSSRTTCAF VTGSVTALAL LMLGLHAPAV LRGETVQTRI
EWMPALGLNA NFFLDGLGLL FAGLILGIGL LIILYARFYL SKQDSMGQFY SYLLLFQGAM
VGIVLSDNIL LLLVFWELTS LSSFLLIGYW KHLPAGRQGA RMALAVTGMG GLAMIAGMLI
LGQIAGSYDL TVILQERDAI QASEWYLPAL VLILIGCFTK SAQFPFHFWL PHAMAAPTPV
SAYLHSATMV KAGLFLMARM WPALAGTPEW FYLVATTGLV TMVVAAKIAL FKDDLKALLA
FSTVSHLGLV TMLLGFGTQS AAIAAIFHII NHATFKAALF MTAGIVDHET HTRDLKRLGG
LRKLMPITFT IGTLAALSMA GIPPLNGFLS KEMMLEEAAH TAWAGQAWLM PVFATLGAVF
SVAYSLRFVA HTFLGPVRND YPHNPHDPGF GMWAAPAFLA LLVVAIGIAP MPVAGWLVDA
AAGATTGEAL HAHIYHWHGL TPALWMSIAA VGGGLVLLGL HAGLMRGWLA TPRPEAKRIF
DGIVDPLAHF SRRFSQGLHD GALSRYFAIA TFAMVAAGGY AFFSGGHTPG TRALTPVDVV
PVIGWLLLIV STCTLVIVHH NRILALVVLG VVGLVVSMGF AYLSAPDLAL TQILVEVATV
MLLLLALNFL PKRTPMESKA PRRIRDAILS GTAGLGIGSL IYMMMTRDFA FPSISGYHLE
NAKTGGGGTN VVNVILVDFR GYDTFGEITV LGIAALVIFA VTETILRPGP ANNRLLSWAQ
EHRHAGDRHP LMLVVATRMM LPVAIMVGVY IFLRGHNLPG GGFIAGLVVA IAALMQYMAS
GFGWTAARKR VEYHALIAMG VLIAGAAGVG AWFAGRPFLT SDYGYVHLPP LEEFELATAM
IFDTGVFLAV LGAVLLALAS ISRIAVRAGE EVSSTPYDID LPRDRFGDR
|
|---|
| |