Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0176 |
Symbol | |
ID | 5082583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 172564 |
End bp | 174069 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640481731 |
Product | signal recognition particle protein |
Protein accession | YP_001166391 |
Protein GI | 146276232 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAAA GTCTGTCCGA ACGCCTTGGC GGCGTGTTCG AGCGGCTCAC CAAACAGGGG GCGCTGACCG AGGACGACGT GGCGACCGCG CTGCGCGAGG TGCGCGTGGC GCTGCTCGAG GCGGATGTCT CGCTGCCGGT CGCGCGCGAT TTCGTCAAGC GGGTGCAGGA GAAGGCGACC GGGCAGGGCG TCACCAAGTC GGTGACGCCG GGCCAGCAGG TCGTGAAGAT CGTCCATGAC GAGCTGGTCA CCGTGCTGCG CGGCGAGGGT CCGGCCGATG CGCTGAAGAT CGACAACCCG CCGGCGACGA TCCTGATGGT GGGCCTGCAG GGCTCGGGCA AGACGACGAC GACGGCGAAA CTGGCCAAGC GGCTCAGCGA GAAGCAGGGC AAGCGGGTGC TGATGGCCTC ACTCGACACC AACCGTCCGG CCGCGATGGA GCAGCTGCAG ATCCTCGGCG CGCAGATCGG GGTGGACACG CTGCCGATCG TCAAGGGCGA GACCGCGGTG CAGATCGCCA AGCGCGCCAA GACCCAGGGG TCCATGGGCG GCTATGACGT CATCATGCTG GACACCGCCG GCCGCCTGCA CATCGACGAA GTGCTGATGG ACGAGGTTCA GGCCGTCCGC GATCTGGCCC AGCCGCGCGA GACGCTGCTG GTGGTCGATG GCCTCACGGG TCAGGACGCG GTGAATGTCG CGGCCGAATT CGACGGCAAG GTGGGCATCT CGGGCGTGGT GCTGACCCGG ATGGACGGCG ACGGCCGCGG CGGTGCTGCG CTGTCGATGC GCGCCGTCAC CGGCAAGCCG ATCCGTTTCG TGGGTCTGGG CGAGAAGATG GACGCGCTCG AGACCTTCGA GCCCGATCGG ATTGCCGGCC GGATCCTCGG CATGGGCGAC ATCGTGGCGC TCGTCGAGAA GGCACAGGAG ACGTTCGAGG CCGAGCAGGC CGCCAAGATG ATGAAGCGGT TCCAGAAGGG CCTCTTCAAC ATGAACGACC TGAAGATGCA GCTGGAGCAG ATGCTCAAGA TGGGCGGCAT CCAGGGCATG ATGGGCATGA TGCCCGGCAT GGGCAAGATG TCGAAGGCGG CCGAGGAGGC GGGCTTCGAC GACAGGTTCA TCCGCCGCCA GGTGGCGCTC ATCAACTCGA TGACCAAGAA GGAGCGGGCC AACCCCGACC TTCTGCAGGC CAGCCGCAAG AAACGGATCG CGGCCGGCGC CGGGCTCGAG GTGCAGGAGC TGAACCGGCT CCTGAAGCAG CACCGGCAGA TGGCCGACAT GATGAAGAAG ATGGGCAAGG GGGGCATGAT GAAGCAGGCC CTCAAGCAGA TGATGGGCAA GGGCGGTGCG CCCGACATGT CCGGCATCAG CCCCGAGGAG ATGCAGGCCG CCGCCGCGGC CATGAAGGGC CGGATGCCCG GCGGCATGGG TGGTTTTCCG GGGATGCCGG GCGGGATGAA GCTGCCGCCG GGCCTCTCGG GCCTGGGCAC GGGCAAGAAG AAATGA
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Protein sequence | MFESLSERLG GVFERLTKQG ALTEDDVATA LREVRVALLE ADVSLPVARD FVKRVQEKAT GQGVTKSVTP GQQVVKIVHD ELVTVLRGEG PADALKIDNP PATILMVGLQ GSGKTTTTAK LAKRLSEKQG KRVLMASLDT NRPAAMEQLQ ILGAQIGVDT LPIVKGETAV QIAKRAKTQG SMGGYDVIML DTAGRLHIDE VLMDEVQAVR DLAQPRETLL VVDGLTGQDA VNVAAEFDGK VGISGVVLTR MDGDGRGGAA LSMRAVTGKP IRFVGLGEKM DALETFEPDR IAGRILGMGD IVALVEKAQE TFEAEQAAKM MKRFQKGLFN MNDLKMQLEQ MLKMGGIQGM MGMMPGMGKM SKAAEEAGFD DRFIRRQVAL INSMTKKERA NPDLLQASRK KRIAAGAGLE VQELNRLLKQ HRQMADMMKK MGKGGMMKQA LKQMMGKGGA PDMSGISPEE MQAAAAAMKG RMPGGMGGFP GMPGGMKLPP GLSGLGTGKK K
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