Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_B0037 |
Symbol | |
ID | 3833368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007641 |
Strand | - |
Start bp | 35373 |
End bp | 37865 |
Gene Length | 2493 bp |
Protein Length | 830 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637824056 |
Product | hemolysin-type calcium-binding region |
Protein accession | YP_425073 |
Protein GI | 83582767 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.475959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCTCG CTTTTAACGC CACCTACTAC CTGACGGCCT ATCCGGACGT CGCCAAGGCG GTGTCGCTGG GCCAGTTCGC CAGCGCCGAG GCCCATTACA ACCTGTTCGG CGCCAAGGAA CTGCGCAACC CCAACAGCTA TTTCGACGCC AACTACTACG CCGCCCAGAA CCCCGACGTT CTGAACGCCG TGTCCAATGG CGCCTTCCCC AGCGTTTGGG CCCACTTCCT CGCCTACGGC GCCGCCGAAG AGCGCGCCCC CTCGACCGCC CTCGCTGCTT TCAACGAGAC CAGCTATCTG GCCGCCAACC CTGACGTCGC CGCCGCCGTG ACCGCCGGCA GCATGCCGTC GGCCCTCTAC CACTTCCTGG CTTTCGGCGT CGACGAAGGC CGTAGCGGCT CGGGCGTGAC CATTGGCGAG AACGTGGGCC AGACTTACAC CCTTACGACG GGTGTGGATG CTCTGACCGG CACCGCCAAT AACGACACAT TCAATGGCTA TGTGAACGTC ACTGCGAACT CTACTAACAG CACCTTTACT GCTTCTGATT CGATCGACGG CGGTGCCGGC AAGGACAGCC TGCATATCAC GGTCGAAGGG AATGCCGCTG GATCGCTTCC CGCCGCGACC ATCACTTCGG TTGAAAATTT CTTCGTCCGT GAAGTTGGCG GTACGGCTGG TTCCTACGAT TTTGGCACGG TTCTCGGTGA GGAGCAGGTT TGGTCGGATC GTTCGACCGA CGCCGTTACC TTCGCCAACC TTGCCGCCGG AACGACTGTC GGCCTCAAGG GCGACGGCGC AACGGTTCTT GGCAATGTGA CCTTCGAGCA GGTGACGGCT GCCGCGGCTG TCAACATTGC GATCGATGGC GTAGGCACGA CCGGTGCGCC GACGATCACC AATGGCGTTG CCGCCAATGC GATCACCACC AACCCGACTG TAGCCACCAT CACCTCGACG GGTGTTGCGA ACACGGTTGG TGCTATTGAT CTGACGGAGA CCGCTGGCTC TGCTACGGCC GGTATCGCCA CGCTCAACAT CAATGCGGAG ACCAATCTGA CCGCCACGCT CGTGGCGGCT GATTTCAACA CCACCGGGGC CGCTCTGAAG GTTGCTGGGC TTGCTTCGAG CGTTGATGTT GGCTCGTTGG GTGTGTTCAA GACCATTGAT GCAAGCGGTC TGACTGCCGG CGGTGTGACC GTTGGCCTCA ACGCTGTGAC GACCAGCTTC GCGGGTGGCG CGGGCAACGA TGTCGTTACT ACGGCGGCTC TTGCTGCGAC GGTTGCTGCC TCGGCGATCA ATGCGGGTGC TGGTACTGCG GATCGCCTTG TGGTGAATGC TACCACTGAT GTGGATACTG CTGCTGAGGC CCAGCACTAC GCTGGCTTCG AGGTTCTGCA GGTCGGGGCT GGCGTCACGG CGGATGCGAG CCTTTTCACC AACTCCGCCA TCAACGCTGT CCGCTTTACG GGCTCGGGTA CCATCAATGG TCTGAATGCC ACACAGGCCG CTAACGTGAC GGTGACCGCT AACGCGACCC CGGTGATTGG CATTACGGGG GCATCCGACG TTGGTCAGAT TGACACCGTA AAGATCACGG CTGACGATGG TGCCGCCGCC GTCAGCACTA TCACACTCGC CAACGTTAAT GCGGCTGGTG TTGAGAACCT TCAGTTCGTT GCCACTGACG CGATTACCGT TAGCTCTCTG ACAAGTTCTG CGGCCGTGAC CGGCATCACC GTCACCGGGG CGCACGATGT CTCGATCACG ACCGGGGCGC TTGGTGTAAA CGTGAACACG GCCATTGATG CTTCGGCCTT GACTGGTGCG TTCACGCTTG ATGCTTCGGC GGCAACTGGG GCAAATGGCT TGTCTGTTAC CAGCGGAACT GGCAACGACA CCATCACCGG AACGGCCAAC GCTGATATCA TCCGGGTTGG TGCGGGCAAC GATACGGTCA CTGCGGGTGC GGGAATCGAT AGGATCGATC TCGGCGCTGG CAATGACACG GTCGTCTTCG GCGAAGCCTT CGCGGCTGGC AACGCCAACC ACGATGTCGT CACTGGGTTC ACTTTCGGCG CTGCGTCGGA GGACAAGTAC GACATCGGCT TTACCGTTGC GAACGGTACG ACCAACGCGA CTGCTAACCT TGCCGCGCTT GCGCCGGTGG CTGTTGCCGA CAACGGTTCG GCTTCCGCCA ATGACGTGAT CTTCACGTTC AGCGGTGCTA ATGATAAGCT CGCCGCGAAT ACGACCGCGA CTACCGCTGT CGCTAATGCA GTGACCGCCC TGACCAGCGG TGGTGATTTC GCTGCGTCGA ATGTTACTGC CGGTGATAGC CTTGTGCTTG TGCTGGATAA TGGAACCGAC TCGTTCATCT TCCATTATGT CGCTGATGCG ACTCCGGCTA CGACGTCGGC TGCCGATCTT GAGTTGATCG GAGTGGTTAC GGGGCAGCTT GCCAGCCAGG TTGTCACGGG CGACTTCATC TAA
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Protein sequence | MSLAFNATYY LTAYPDVAKA VSLGQFASAE AHYNLFGAKE LRNPNSYFDA NYYAAQNPDV LNAVSNGAFP SVWAHFLAYG AAEERAPSTA LAAFNETSYL AANPDVAAAV TAGSMPSALY HFLAFGVDEG RSGSGVTIGE NVGQTYTLTT GVDALTGTAN NDTFNGYVNV TANSTNSTFT ASDSIDGGAG KDSLHITVEG NAAGSLPAAT ITSVENFFVR EVGGTAGSYD FGTVLGEEQV WSDRSTDAVT FANLAAGTTV GLKGDGATVL GNVTFEQVTA AAAVNIAIDG VGTTGAPTIT NGVAANAITT NPTVATITST GVANTVGAID LTETAGSATA GIATLNINAE TNLTATLVAA DFNTTGAALK VAGLASSVDV GSLGVFKTID ASGLTAGGVT VGLNAVTTSF AGGAGNDVVT TAALAATVAA SAINAGAGTA DRLVVNATTD VDTAAEAQHY AGFEVLQVGA GVTADASLFT NSAINAVRFT GSGTINGLNA TQAANVTVTA NATPVIGITG ASDVGQIDTV KITADDGAAA VSTITLANVN AAGVENLQFV ATDAITVSSL TSSAAVTGIT VTGAHDVSIT TGALGVNVNT AIDASALTGA FTLDASAATG ANGLSVTSGT GNDTITGTAN ADIIRVGAGN DTVTAGAGID RIDLGAGNDT VVFGEAFAAG NANHDVVTGF TFGAASEDKY DIGFTVANGT TNATANLAAL APVAVADNGS ASANDVIFTF SGANDKLAAN TTATTAVANA VTALTSGGDF AASNVTAGDS LVLVLDNGTD SFIFHYVADA TPATTSAADL ELIGVVTGQL ASQVVTGDFI
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