Gene Rru_A3748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3748 
Symbol 
ID3837205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp4296213 
End bp4297316 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content64% 
IMG OID637827873 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_428829 
Protein GI83595077 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTCA AATGCGGCAT CGTTGGTCTG CCCAACGTCG GCAAATCGAC TCTTTTCAAC 
GCCCTGACCT CGACCGCCGC CGCCCAGGCG GCCAATTTTC CCTTTTGCAC CATCGAGCCC 
AATGTCGGGC GGGTGGCGGT GCCCGATCCG CGGCTTGATA CCCTGGTCGA GATCGGCAAA 
AGCGCCAATA AGGTGCCGAC CCAGCTTGAA TTCGTCGATA TCGCCGGTTT GGTGCGCGGC 
GCCTCGAAGG GCGAGGGGCT GGGCAACCAG TTCCTGGCCA ATATCCGCGA GGTCGACGCC 
ATCGTCCATG TGCTGCGCTG CTTTGAAGAC GGCGACATCA CTCATGTCGA TGGCTCGGTC 
GATCCCTTGC GCGATGCCGA GACGGTCGAG ACCGAGCTGA TGCTGGCCGA CTTGGAAAGC 
CTGGAAAAGC GCCATTACAA TCTGTCCAAG AAGGCCAAGG GCGGCGATAT GGACGCCAAG 
GCGCTGATTG GCGTGATCGA GCCGGCGCTC GAGGCCTTGC GCGCGGGCAA GACGGCGCGC 
ACCGTCGCCC CGCGCGATGC CGAGGAGCGC AAGCTGTTCG CCCAGCTTCA GCTTCTCACC 
TCCAAGCCGG TGCTGTACGT CTGCAATGTC GAGGAGGCCT CGGCCGCTTC GGGCAACGCG 
CTGTCGGCCA AGGTCGCCGA TCAGGCGGCC AAGGAAGGCG CCCTGGCCGT GGTCATCAGC 
GCCGCCATCG AATCCGAGGT CGCCCAGCTT GAAGAAGAAG CCGAGAAGGC CGAGTTCCTG 
GAAAGCCTCG GTCTCGCGGA AACCGGCCTG ACCCGGGTGA TCCGCGCCGG CTATGACCTG 
CTGGAGCTGA TCACCTTCTT TACTTGCGGC CCCAAGGAAG CCCGCGCCTG GACGGTGCGG 
CGCGGGTCGC GCGCCCCCCA GGCCGCCGGC GTCATCCATA GCGATTTCGA ACGCGGCTTC 
ATCCGCGCCG AAACCATCGC CTATGCCGAT TACATCGCCC AGGGCGGCGA AAGCGGCGCC 
AAGGAAGCGG GCAAGATGCG CTCGGAAGGC AAGGACTACG TGGTCCAGGA CGGCGACGTC 
TTCCTGTTCC GCTTCAACGT CTAA
 
Protein sequence
MGFKCGIVGL PNVGKSTLFN ALTSTAAAQA ANFPFCTIEP NVGRVAVPDP RLDTLVEIGK 
SANKVPTQLE FVDIAGLVRG ASKGEGLGNQ FLANIREVDA IVHVLRCFED GDITHVDGSV 
DPLRDAETVE TELMLADLES LEKRHYNLSK KAKGGDMDAK ALIGVIEPAL EALRAGKTAR 
TVAPRDAEER KLFAQLQLLT SKPVLYVCNV EEASAASGNA LSAKVADQAA KEGALAVVIS 
AAIESEVAQL EEEAEKAEFL ESLGLAETGL TRVIRAGYDL LELITFFTCG PKEARAWTVR 
RGSRAPQAAG VIHSDFERGF IRAETIAYAD YIAQGGESGA KEAGKMRSEG KDYVVQDGDV 
FLFRFNV