| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3676 |
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| Symbol | |
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| ID | 3837132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 4223390 |
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| End bp | 4224673 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637827800 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_428757 |
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| Protein GI | 83595005 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCC TCATCATCTT CACCCTGCTG CTCTGCCTGA TGCTGACGGG CATGCCGATC
TCGATCTCGC TCGGCCTGAC GGTTCTGACC TTCCTGTTCA CCATGACCAC GGTGCCGATC
GAATCGGTGG CCTTGAAGCT GTTCACCGGC ATCGAGAAGT TCGAGATCAT GGCGATCCCG
TTCTTCATTC TGGCGGGCAA CTTCCTGACC CACGGCGGGG TCGCCAAGCG CATGATCAAT
TTCGCCACGG CGATGGTCGG CCATTGGTAT GGCGGCCTGG GGCTGGGCGG CGTGGTCGCC
TGCGCGCTGT TCGCCGCCAT TTCGGGCTCG TCGCCGGCCA CCGTCGTCGC CATCGGCTCG
ATCTTGCTGC CGGCGATGGT CAAGCAGGGC TTTCCCCGGC GCTTCGGCGC CGGCGTCATC
ACCACCTCGG GCGCGCTTGG CATCCTGATC CCGCCGTCGC TGGTCATGGT GATGTACGCG
GTGGCGACCA ACACCTCGGT CGGCGCCCTG TTCATGGCCG GCGTCGTCCC CGGGCTGGTG
CTGGCCACCT TGCTGGGCGT CACCACCTCG GTCATCGCCC GCAAGAACAA CTATCCGCGC
CTGCCCAAGG CGAGTTGGGC GACCCGGGCC AAGGCCTTCC GCGAGGCGAT CTGGGGCCTG
ATGCTGGTCG TCATCGTCAT CGGCGGCATC TATTCCGGGA TCTTCACCCC GACCGAAGCC
GCGGCGATGA GCGCCGTCTA CGCCTTTCTG ATCGCCGTCT TCGTCTATAA GGACATGCCG
CTGCGCGGCG TGGTGAAGAT CTTGCTGTCC TCGGCCTCGA TGTCGGCGAT GCTGCTCTAC
ATCATCACCA ACGCGGTGCT GTTCAGCTTC GTTCTGGCCA ATGAGAACAT TCCCCAGGCC
ATCGCCGACT GGATCGTCGG CAAGGAACTG GGCATCGTCG CCTTCTTGCT GGTGGTCAAC
GTCCTGCTGC TGGCGGCGGG CAATTTCATG GAGCCGTCAT CGATCGTTCT GATCATGGCG
CCTATTCTTT TCCCGGTGGC GATGAAGCTG GGCATCGATC CGGTGCATTT CGGCATCCTG
ATCATCGTCA ACATGGAGGT CGGCATGTGC CATCCGCCGG TCGGGCTGAA CCTCTATGTC
GCCTCGGGCA TTACCAAGAT GGGAATATCC GAGCTGACGG TGGCGGTGAT GCCCTGGCTG
CTGACCATGC TGGGCTTCCT GATCGTCGTC ACCTATTGGC CGGGCCTGTC GCTGTGGCTG
CCCCGGGCCC TGGGCATGAT GTAG
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| Protein sequence | MSALIIFTLL LCLMLTGMPI SISLGLTVLT FLFTMTTVPI ESVALKLFTG IEKFEIMAIP
FFILAGNFLT HGGVAKRMIN FATAMVGHWY GGLGLGGVVA CALFAAISGS SPATVVAIGS
ILLPAMVKQG FPRRFGAGVI TTSGALGILI PPSLVMVMYA VATNTSVGAL FMAGVVPGLV
LATLLGVTTS VIARKNNYPR LPKASWATRA KAFREAIWGL MLVVIVIGGI YSGIFTPTEA
AAMSAVYAFL IAVFVYKDMP LRGVVKILLS SASMSAMLLY IITNAVLFSF VLANENIPQA
IADWIVGKEL GIVAFLLVVN VLLLAAGNFM EPSSIVLIMA PILFPVAMKL GIDPVHFGIL
IIVNMEVGMC HPPVGLNLYV ASGITKMGIS ELTVAVMPWL LTMLGFLIVV TYWPGLSLWL
PRALGMM
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